Gamma proteobacterium HdN1: HDN1F_25790
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Entry
HDN1F_25790 CDS
T01300
Symbol
gabD
Name
(GenBank) Succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00250
Alanine, aspartate and glutamate metabolism
gpb00310
Lysine degradation
gpb00350
Tyrosine metabolism
gpb00650
Butanoate metabolism
gpb00760
Nicotinate and nicotinamide metabolism
gpb01100
Metabolic pathways
gpb01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
HDN1F_25790 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HDN1F_25790 (gabD)
00310 Lysine degradation
HDN1F_25790 (gabD)
00350 Tyrosine metabolism
HDN1F_25790 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
HDN1F_25790 (gabD)
Enzymes [BR:
gpb01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
HDN1F_25790 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
HDN1F_25790 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
HDN1F_25790 (gabD)
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Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
CBL46162
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Position
complement(3173408..3174865)
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AA seq
485 aa
AA seq
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MPSSLKRPDLCRSQIFINGQWCNADSLATANVTNPATGETITTVPRAGQAETERAISAAN
NALPNWRARTAKERSQLLKRWYQLMLDHQEDLATLLTLEQGKPLAEARGEILYGASFIEW
FAEEAKRAYGDIIPGFSADRRLLVYKQPIGVVAAITPWNFPNAMITRKLGPALAAGCTVV
LKPASDTPLSALALAALAEEAGIPAGVINVITGPASAIGPVLTHSPIVRKISFTGSTEVG
RQLMAESSGTLKKLSLELGGNAPFIVFDDADLDAAVQGLMASKFRNSGQTCVCTNRVLVQ
ASVHDRFVEKLNKAVQSLKVGNGLHEGVNQGPLINPAALSHAEHLLATLPAGAQVVTGGK
RHALGGTFFEPTIVTGIRNDHALAQQEQFAPITPVIRFETEEEAIALANATEYGLASYFY
SRDLNRMFRVSEALEYGMVGVNEGIVSTEVAPFGGVKASGLGREGSKYGIDEYLEIKYVC
IGGVR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgccttcctcactcaaacgccccgatttatgccgctcacaaatttttattaacggccaa
tggtgcaacgccgacagcctcgccacggccaacgtaaccaatcccgccaccggcgaaacc
atcaccaccgtaccgcgtgcggggcaagcggaaaccgaacgcgcaatctcagcggcaaat
aacgctctaccgaactggcgtgcccgcactgcaaaagagcgctcgcagctactcaaacgc
tggtatcagctcatgctggaccaccaagaagatctcgccacgctcttgaccctcgaacaa
ggcaaaccacttgccgaagcacgcggtgaaattctctacggcgcctccttcattgaatgg
tttgccgaagaagccaaacgcgcctacggcgacatcatcccaggctttagcgctgatcgg
cggcttcttgtctacaaacagcccattggcgtagtggccgcgatcacgccatggaacttt
cccaatgcaatgatcacccgcaagcttggccccgcccttgctgccggctgcaccgtggta
ctcaagcccgcctccgacactccgttaagcgcgctagctctcgccgcactagccgaagaa
gcgggcatccctgcaggcgtaatcaacgtaatcaccggccccgcatctgccatcggcccc
gtgctcactcacagccccatcgttcgcaaaatctcctttacgggctccaccgaggtaggc
cgccaactgatggcagaatcctccggcaccctcaaaaagctctcgttggaactcggcggc
aatgcgccctttatcgtttttgacgatgccgacttagacgccgccgtacagggtttaatg
gcctccaagtttcgcaactccgggcaaacctgcgtatgcaccaaccgcgtactggtgcaa
gcctcggtacatgatcggtttgtcgaaaagctcaacaaagccgttcaatcgctcaaagtt
ggcaacggcctgcatgaaggcgtcaaccaaggtccgctgatcaaccctgcggcactctcc
cacgcggaacacttactggcaaccctccccgcaggtgcccaagtcgtcaccggcggcaag
cgccacgccttgggcggcacctttttcgaaccgacgatcgtaaccggcatccgcaacgat
cacgcacttgcacaacaagagcagtttgcccccatcaccccagtcatccgctttgaaacc
gaagaagaggccatcgcgcttgccaacgccaccgagtacggccttgcttcctacttttac
agccgcgacctcaaccgcatgttccgcgtctctgaggcgctggaatacggcatggttggc
gtaaacgaaggcatcgtatccaccgaagtcgcacccttcggcggagtgaaagcctccggc
cttggccgcgaaggttcgaaatacggcatcgacgaataccttgaaatcaaatatgtgtgc
atcggtggagtacgctaa
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