Gamma proteobacterium HdN1: HDN1F_26420
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Entry
HDN1F_26420 CDS
T01300
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
gpb
Gamma proteobacterium HdN1
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gpb02000
]
HDN1F_26420
Transporters [BR:
gpb02000
]
Other transporters
Pores ion channels [TC:
1
]
HDN1F_26420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
CBL46225
LinkDB
All DBs
Position
complement(3248564..3250690)
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AA seq
708 aa
AA seq
DB search
MHFHRALLRAGIALAGLHTGTTFATELQTAEPRNSDTMLLPTLAIQSDAARTSLANQEAS
SATHTSISALDMPASLDSVNDEQLRERGQLHSAEAVSQTVGISANGTAGGGGMNFTSRGF
GTVGIAVDGLNSAVAAGTINYPDLLWGYERVDVLRGPGSLLYGSGTSGATINFVRKKPRE
IFGADLLLGMARYDTTNLGAGVTGPLSETVFYRVDAWAERRHNERDLSEQKNLKFAPSLR
WVPHQDLTIDLAAEYSSRHPERYFGTPLVDGNMRRSMRNENYNAQNSEVYYQDWRYRADV
DWKISRGFNLQNALYHLRSDRLWKNIESYEYNAADDTIARSSYLKIGHDLEQTGNDTTLK
ISAAQHEIAIGGSVSRYAFTSTSNSPYVGESVVSRVNPDHGIWDSPSPYQKGYDSRLSAE
ALFLEDAWRIAPRWLLMAGVRGDWYDFDRKNINSAPKGDQYDIRLRGTSWLAGATYSLND
NTRIYAQNTVGHDPVNSLLSLRKSDRDFELTKAHQLEIGLKQDLPEDQGSWTLAVYRIEK
TDIITSDPNNPKESIQGGEQIARGIEFSGQADLSAAFSLEGNIAYTDSWYKNLWRTQNGE
AVSYADHTPRNVPEFTSNLWGHYRLAQDWTSSIGLRHVSARYTSDDNTLEMPKYTLLDAL
IRWQVAPSTQLALSGRNLTNRFYASAAYDEQWMIGTGRSYDLTLQASY
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
gtgcattttcatagagctctgcttcgagcaggcattgcactggccggcctacacaccgga
accactttcgcaaccgagctgcaaaccgcagaaccccgcaactcagacaccatgctgttg
ccgactctggcaatccagagcgacgccgcgcgcacatcgctcgcgaaccaagaagcaagt
tctgcgactcacaccagcatatctgcactggatatgcccgcaagcctagatagcgtaaac
gatgagcagctacgcgaacgcggccaactccacagcgctgaagccgtgtcacaaacggtt
ggcatctcggccaacggcactgcgggcggtggcgggatgaactttaccagccgagggttt
ggcacagtaggcatagcggtagatggactcaatagcgcagtggccgccggcacgatcaat
tatcccgacctactctggggatatgagcgcgtagacgtattgcgcggcccagggagttta
ctgtacggaagtggcacatcgggcgcgaccatcaactttgtacgcaaaaagccgcgtgag
atttttggggcagacctgctgcttggaatggcgcgatacgacaccaccaaccttggggct
ggcgttactggccctttgagcgaaacggttttctatcgcgtagatgcttgggcagaacgc
cgccacaatgaacgcgatctcagcgaacagaaaaacctgaagtttgcgccctctttacgc
tgggtgcctcatcaggatttaaccatcgacctagctgccgaatacagcagccgtcatcca
gagcgttatttcggaactccgctggtagatggcaatatgcgtcgctccatgcgcaacgaa
aactataatgcacaaaatagcgaagtgtactatcaagattggcgttaccgtgcagatgtt
gattggaaaatcagccgtggattcaatctccagaatgcgctctatcatctgcgctctgat
cgcctctggaagaatatcgaatcctacgaatacaacgccgccgacgataccattgcgcgc
tcgtcttatctgaaaatcggccatgatttagaacaaaccggcaatgacactacgctgaaa
atcagtgccgcccaacacgaaattgcaatcggcggatcggtatcaagatatgcttttacc
tccacaagcaactcaccctacgtgggcgaatcggtagtttcccgcgtgaatcccgaccat
ggaatctgggatagcccgagcccctatcaaaaaggctacgactctaggctatccgccgag
gcactgttcttggaagatgcttggcgcatcgcaccacgctggcttctaatggcgggggta
cgtggcgactggtatgactttgaccgaaaaaatatcaacagcgcgcccaagggtgatcaa
tacgatattcgcctgcgaggcacctcgtggctagcaggtgcaacctactcgctcaacgac
aatacgcgcatctacgcgcaaaacacggtgggccatgacccggtcaacagcctgctgtcc
ttgcgaaaatccgatcgcgattttgagcttaccaaagcccaccaattggagattggctta
aaacaggatcttccagaagatcaaggctcgtggactctggcggtttaccgaattgaaaaa
accgacattattaccagcgaccccaacaatcccaaagaatccattcaggggggcgaacaa
attgcgcgaggcattgaattcagcggccaagccgatctaagcgccgcgttttcgctggaa
ggaaatatcgcctacaccgatagctggtacaaaaacctatggcgcacccaaaacggcgag
gcggtcagttatgccgatcacacgccgcgtaacgtacctgaatttacatcgaacctttgg
gggcactaccggcttgcacaggactggacaagctccatcggcctgcgccatgtgagcgca
cgttataccagcgacgataatacgctggaaatgccgaaatacacgctgctagatgccctt
attcgctggcaggttgcgcccagcacacaattggcattgagtggccgcaatctaaccaat
cggttctacgccagcgctgcatacgatgaacaatggatgattggaacgggccgcagctac
gatctaacgttgcaagccagctactga
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