Gamma proteobacterium HdN1: HDN1F_28060
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Entry
HDN1F_28060 CDS
T01300
Symbol
thiC
Name
(GenBank) Thiamine biosynthesis protein
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00730
Thiamine metabolism
gpb01100
Metabolic pathways
gpb01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
HDN1F_28060 (thiC)
Enzymes [BR:
gpb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
HDN1F_28060 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
CBL46389
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Position
3452042..3453922
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AA seq
626 aa
AA seq
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MTASVEQALSQRAQVDAAAIQPFPNSQKIYVKGTQFDLRVPMREISLSDTPTALGNVKNP
PVAVYDTSGPYTDPDVTIDIRSGLAPLREAWVQRRGGVEQLGDLSSSYGRRRARDVQLET
LRFSHLRKPYRSNGSHGITQMQYARRGEITEEMEYIAIRENLKLQEARALGRIGQQHPGY
SFGAAIPNEITPEFVRDEVARGRAIIPANINHTELEPMIIGRNFLTKINANIGNSALGSS
IEEEVEKMTWAIRWGADTVMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVDGIAE
DLTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPITAKRVTGIVSRGGSILAKWCLAHHK
ENFLYTHFDDICDIMTAYDVTFSLGDGLRPGAIADANDEAQFGELKTLGELTKRAWKFGA
QVMIEGPGHVPMHMIKANMDKQLELCDEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWF
GTAMLCYVTPKEHLGLPDKNDVKQGIIAYKIAAHAADLGKGHPGAQIRDNAVSKARFEFR
WEDQFNLALDPDTARAYHDETLPKDAHKSAHFCSMCGPKFCSMKITQEVRDYADEHGMNV
EDALASGMDEKSKEFVSTGAEIYQKA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcttccgtagaacaggcgctcagccagcgtgcccaggttgacgccgccgccatc
cagccttttcccaattcacaaaagatctacgtaaagggcacgcagtttgatcttcgcgta
ccgatgcgcgagatttccttgagcgatactccgacggcgctcggcaatgtaaaaaacccg
cccgttgccgtgtacgatacctccggcccctataccgatccagacgtgaccattgatatt
cgcagcggccttgcgcccctgcgtgaggcgtgggtgcagcgtcgcggtggcgtggagcag
ctcggtgatttgagttcatcgtatggccgtcgcagagcgcgcgacgtgcagttggaaacg
ctacgcttctctcacctaagaaagccttatcgtagcaacggcagccacggcattacgcaa
atgcagtatgcgcgccgcggtgagattaccgaggagatggaatacattgcgattcgggaa
aacctgaagctgcaagaggcgcgagcgcttgggcgtatcggccagcaacaccccggctat
tcctttggcgccgcgatccccaatgagatcactccagaatttgtgcgtgatgaggttgcc
agagggcgggcgattattccggcgaacatcaatcataccgaacttgagccgatgattatt
ggccgtaattttctgaccaaaattaacgccaatattggtaactctgcgttgggttcttcg
attgaagaagaagtcgaaaagatgacgtgggcgatccgctggggcgcggataccgtcatg
gacctttccaccggcaaaaacattcatgagacgcgggagtggatcatccgcaactccccg
gtgcctattggcacagtgccgatttatcaggcgctggaaaaggtcgatggcattgcagaa
gatctgacgtgggagattttccgcgacacgctgattgagcaggccgagcagggcgtggat
tatttcacgatccacgccggagttctgctgcgctacgttccgatcacggccaagcgggtg
acggggattgtctcgcgcgggggttcgattctggcgaagtggtgtttggcgcaccacaaa
gaaaacttcctctatacccatttcgacgacatctgcgacatcatgaccgcctacgacgtg
accttctcgctgggggatggcctgcgacccggtgcgatcgccgatgccaacgatgaagcc
caatttggcgagctgaaaaccttaggtgagctgaccaagcgtgcgtggaagtttggtgca
caggtcatgatcgaaggtcctggccacgtgcctatgcatatgatcaaagcgaacatggac
aagcagcttgaactctgcgacgaagcgcctttctatacgctaggccctctgacgacggat
atcgctcccggctatgaccacatcacctcagcgattggcgcggccatgatcggctggttc
ggcactgcaatgctgtgctacgtcacccccaaagagcaccttggtctgccggacaaaaat
gacgtaaaacaaggcattattgcctacaaaattgccgcgcacgccgccgaccttggaaaa
ggccaccctggagcgcagattcgcgataacgcggtctccaaagcgcgctttgagtttcgc
tgggaagatcagttcaaccttgccctcgacccagacaccgcgcgcgcctaccacgatgaa
accctaccgaaggatgcgcacaaatcagcgcatttttgctcgatgtgcggccccaagttc
tgctccatgaagatcacccaagaagtgcgcgattatgccgacgaacacggcatgaatgta
gaagatgcgctcgcgtcgggaatggatgaaaagtccaaagagtttgtttcgacgggggct
gaaatttaccagaaagcctag
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