KEGG   Gamma proteobacterium HdN1: HDN1F_28060
Entry
HDN1F_28060       CDS       T01300                                 
Symbol
thiC
Name
(GenBank) Thiamine biosynthesis protein
  KO
K03147  phosphomethylpyrimidine synthase [EC:4.1.99.17]
Organism
gpb  Gamma proteobacterium HdN1
Pathway
gpb00730  Thiamine metabolism
gpb01100  Metabolic pathways
gpb01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:gpb00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    HDN1F_28060 (thiC)
Enzymes [BR:gpb01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.17  phosphomethylpyrimidine synthase
     HDN1F_28060 (thiC)
SSDB
Motif
Pfam: ThiC_Rad_SAM ThiC-associated
Other DBs
NCBI-ProteinID: CBL46389
LinkDB
Position
3452042..3453922
AA seq 626 aa
MTASVEQALSQRAQVDAAAIQPFPNSQKIYVKGTQFDLRVPMREISLSDTPTALGNVKNP
PVAVYDTSGPYTDPDVTIDIRSGLAPLREAWVQRRGGVEQLGDLSSSYGRRRARDVQLET
LRFSHLRKPYRSNGSHGITQMQYARRGEITEEMEYIAIRENLKLQEARALGRIGQQHPGY
SFGAAIPNEITPEFVRDEVARGRAIIPANINHTELEPMIIGRNFLTKINANIGNSALGSS
IEEEVEKMTWAIRWGADTVMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVDGIAE
DLTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPITAKRVTGIVSRGGSILAKWCLAHHK
ENFLYTHFDDICDIMTAYDVTFSLGDGLRPGAIADANDEAQFGELKTLGELTKRAWKFGA
QVMIEGPGHVPMHMIKANMDKQLELCDEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWF
GTAMLCYVTPKEHLGLPDKNDVKQGIIAYKIAAHAADLGKGHPGAQIRDNAVSKARFEFR
WEDQFNLALDPDTARAYHDETLPKDAHKSAHFCSMCGPKFCSMKITQEVRDYADEHGMNV
EDALASGMDEKSKEFVSTGAEIYQKA
NT seq 1881 nt   +upstreamnt  +downstreamnt
atgaccgcttccgtagaacaggcgctcagccagcgtgcccaggttgacgccgccgccatc
cagccttttcccaattcacaaaagatctacgtaaagggcacgcagtttgatcttcgcgta
ccgatgcgcgagatttccttgagcgatactccgacggcgctcggcaatgtaaaaaacccg
cccgttgccgtgtacgatacctccggcccctataccgatccagacgtgaccattgatatt
cgcagcggccttgcgcccctgcgtgaggcgtgggtgcagcgtcgcggtggcgtggagcag
ctcggtgatttgagttcatcgtatggccgtcgcagagcgcgcgacgtgcagttggaaacg
ctacgcttctctcacctaagaaagccttatcgtagcaacggcagccacggcattacgcaa
atgcagtatgcgcgccgcggtgagattaccgaggagatggaatacattgcgattcgggaa
aacctgaagctgcaagaggcgcgagcgcttgggcgtatcggccagcaacaccccggctat
tcctttggcgccgcgatccccaatgagatcactccagaatttgtgcgtgatgaggttgcc
agagggcgggcgattattccggcgaacatcaatcataccgaacttgagccgatgattatt
ggccgtaattttctgaccaaaattaacgccaatattggtaactctgcgttgggttcttcg
attgaagaagaagtcgaaaagatgacgtgggcgatccgctggggcgcggataccgtcatg
gacctttccaccggcaaaaacattcatgagacgcgggagtggatcatccgcaactccccg
gtgcctattggcacagtgccgatttatcaggcgctggaaaaggtcgatggcattgcagaa
gatctgacgtgggagattttccgcgacacgctgattgagcaggccgagcagggcgtggat
tatttcacgatccacgccggagttctgctgcgctacgttccgatcacggccaagcgggtg
acggggattgtctcgcgcgggggttcgattctggcgaagtggtgtttggcgcaccacaaa
gaaaacttcctctatacccatttcgacgacatctgcgacatcatgaccgcctacgacgtg
accttctcgctgggggatggcctgcgacccggtgcgatcgccgatgccaacgatgaagcc
caatttggcgagctgaaaaccttaggtgagctgaccaagcgtgcgtggaagtttggtgca
caggtcatgatcgaaggtcctggccacgtgcctatgcatatgatcaaagcgaacatggac
aagcagcttgaactctgcgacgaagcgcctttctatacgctaggccctctgacgacggat
atcgctcccggctatgaccacatcacctcagcgattggcgcggccatgatcggctggttc
ggcactgcaatgctgtgctacgtcacccccaaagagcaccttggtctgccggacaaaaat
gacgtaaaacaaggcattattgcctacaaaattgccgcgcacgccgccgaccttggaaaa
ggccaccctggagcgcagattcgcgataacgcggtctccaaagcgcgctttgagtttcgc
tgggaagatcagttcaaccttgccctcgacccagacaccgcgcgcgcctaccacgatgaa
accctaccgaaggatgcgcacaaatcagcgcatttttgctcgatgtgcggccccaagttc
tgctccatgaagatcacccaagaagtgcgcgattatgccgacgaacacggcatgaatgta
gaagatgcgctcgcgtcgggaatggatgaaaagtccaaagagtttgtttcgacgggggct
gaaatttaccagaaagcctag

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