Gamma proteobacterium HdN1: HDN1F_28580
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Entry
HDN1F_28580 CDS
T01300
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00541
Biosynthesis of various nucleotide sugars
gpb01100
Metabolic pathways
gpb01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HDN1F_28580 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
gpb01005
]
HDN1F_28580 (kdsA)
Enzymes [BR:
gpb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
HDN1F_28580 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
gpb01005
]
Lipid A
HDN1F_28580 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
CBL46441
UniProt:
E1VNP9
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All DBs
Position
3516239..3517090
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AA seq
283 aa
AA seq
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MSVTQQVISLGNIRIGNELPFVLFGGMNVLESRDLAMQVCEHYVRVTEKLGIPYVFKASF
DKANRSSMHSFRGPGLDAGLKIFEEIKKTFKVPVITDVHEPHQAAAVAEVADIIQLPAFL
SRQTDLVVAMARTNAIINIKKAQFLAPQEMKHIINKCEEAGNHKLILCERGSCFGYNNLV
VDMLGFGIMKQFGYPVFFDVTHALQMPGGRADSAGGRRAQVTELARAGISQGLAGLFLEA
HPDPDKAMCDGPCALRLDRLEPFLDQLKQMDTLVKHFAPLTTA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtaacccagcaggtaatctccctaggcaatattcgcattggcaatgagctgccg
ttcgtactgtttggcggcatgaacgtattggaatctcgtgaccttgccatgcaggtttgc
gaacactatgtgcgggtcaccgagaaactcgggattccttacgtgttcaaggcgtccttt
gataaggccaatcgctcgtccatgcactccttccgaggccctggcttggacgcgggcttg
aagatttttgaagaaatcaaaaagaccttcaaggttccggtgattaccgatgtgcacgag
cctcatcaagccgcagcagttgcggaagtggccgacatcattcagctgccggcatttttg
tcgcggcagacggatctggtggttgccatggcgcgcaccaacgccattatcaacatcaaa
aaagcccaattccttgcgcctcaagagatgaagcacatcatcaataagtgtgaggaagcg
ggtaaccataagctgattctgtgcgaacgcggttcttgctttgggtacaacaacctcgta
gtcgatatgctgggctttggcatcatgaaacagttcggttatccggtattttttgatgtg
acccatgcactgcaaatgccgggtggaagggccgattctgcgggcgggcggcgggcgcag
gtcaccgaacttgcgcgggccggtatttcgcaggggcttgccggattgtttcttgaggct
caccctgatccggataaagcgatgtgcgacggcccatgtgcgctacgccttgatcgcttg
gaaccgttcttggatcagttgaaacaaatggatacgcttgttaaacattttgcgccgcta
accaccgcttag
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