KEGG   Gamma proteobacterium HdN1: HDN1F_28900
Entry
HDN1F_28900       CDS       T01300                                 
Symbol
parE
Name
(GenBank) Gram negative topoisomerase IV, subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
gpb  Gamma proteobacterium HdN1
Brite
KEGG Orthology (KO) [BR:gpb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gpb03032]
    HDN1F_28900 (parE)
   03036 Chromosome and associated proteins [BR:gpb03036]
    HDN1F_28900 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gpb02048]
    HDN1F_28900 (parE)
Enzymes [BR:gpb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HDN1F_28900 (parE)
DNA replication proteins [BR:gpb03032]
 Prokaryotic type
  DNA Topoisomerases
   HDN1F_28900 (parE)
Chromosome and associated proteins [BR:gpb03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    HDN1F_28900 (parE)
Prokaryotic defense system [BR:gpb02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    HDN1F_28900 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3 TOPRIM_C
Other DBs
NCBI-ProteinID: CBL46473
UniProt: E1VNT1
LinkDB
Position
3560506..3562395
AA seq 629 aa
MSANTYNAESIEVLSGLDPVRRRPGMYTDTTRPNHLAQEVIDNSVDEALAGHANTVSVIL
HPDGSMEISDNGRGMPVDIHPEQGRPGVEVILCTLHAGGKFSNKNYTFSGGLHGVGVSVV
NALSSVLEVTVKRDGKVHRMGFKGGEKASELEVVGNCAKRDTGTTIRFLPDPSYFDTPKF
LVSKLLHLLRAKAVLCPRLRVTFKDAGTGEEQEWYYENGLRDYLMSSHVDTPLLPADPFV
GSVSGESEVADWAVSWLPEGGDLVAESYVNLIPTLQGGTHVNGFRSGLTDAMREYCEFRN
LMPRGVKLSPEDLWDQASYVLSVKMQDPQFAGQIKERLSSRQIAAFVSGVVKDAFSLWLS
QNTQEGDALAELAINNANRRMRAAKKVARKKVTAGPALPGKLADCTSQDSENGELFLVEG
DSAGGSAKQARDREYQAVMPLRGKILNTWEVDSSEILASQEVHDIAVAIGVDPASSDLEN
LRYNKICILADADSDGAHIATLLCALFLRHFRPVVDAGHIYIAMPPLYRIDIGKEVFYAL
DEGEKQGVLDRIKAEKKRGQIQVTRFKGLGEMNPIQLRETTMARDTRRLVQLTVEDAEST
CDLVDLLLAKKRSSDRRAWLEDKGNLAAV
NT seq 1890 nt   +upstreamnt  +downstreamnt
atgtccgcaaatacttataacgcagagtcgattgaagtcctcagtgggcttgatccggta
cgccgtcgccccggcatgtacaccgataccacacgtcctaaccaccttgcgcaagaagtc
attgataacagcgtggatgaggcgctcgcaggccatgcgaataccgtgagtgtcatttta
caccccgatggttccatggaaatcagcgataacggccgtggtatgccggtcgatattcat
ccagagcaggggaggccaggcgttgaagtcattctttgtaccctgcatgcaggcggtaaa
ttctcgaataaaaactacaccttttcaggtggcttgcacggcgtgggcgtatcggtcgta
aatgcgctatccagcgtgcttgaggtcacggtaaagcgcgatggcaaagtgcatcgcatg
ggctttaagggcggtgaaaaggccagcgagctcgaagttgtaggcaactgcgccaagcgc
gataccggcacgacgattcgctttttaccggacccatcctattttgatacgccgaaattt
ttggtttccaaattgctccaccttttgcgtgccaaggcggttttgtgcccgcgcttgcgt
gttaccttcaaggatgcaggaaccggcgaagaacaggaatggtattacgaaaacggcctt
cgcgattatttaatgtcttcgcatgtcgataccccacttttgcccgcagacccgtttgtc
ggaagcgtgagcggggaaagtgaagtcgcagattgggccgttagctggctgcctgaaggc
ggagatctggttgccgagagctatgttaacctgattccaacgcttcaaggcggaacacac
gtcaacggctttcgcagtggtttgaccgatgcgatgcgcgagtattgcgaattccgcaat
ttgatgccgcgcggtgtaaagctctcgccagaagatttatgggatcaagcaagttacgtt
ctgtccgtgaaaatgcaagacccacagttcgcagggcagatcaaagaacggctttcctct
cgccagattgcggcgtttgtttccggcgttgtaaaagatgcgttcagcttgtggctctcc
cagaacacgcaagagggtgatgccttagcggagctggcaatcaataacgccaaccgcagg
atgcgagccgccaaaaaagtagcgcgaaaaaaggttacggcagggcctgcgttgcccgga
aagctggcagattgtaccagccaggattctgaaaatggcgaactgttcttggtggaaggc
gattctgccggcggttctgccaagcaagcacgcgatcgtgaatatcaagcagtgatgcca
ctgcgcggtaaaattctcaatacttgggaagtagacagcagcgaaattcttgcctcgcaa
gaagtccacgatattgccgtcgccattggcgtagaccccgcatctagcgatcttgaaaac
ctgcgctacaacaaaatttgcatactcgccgatgctgattccgacggcgcgcatattgcc
actttactttgcgcgttattcttgcgtcattttcggccagtagtggatgcggggcatatt
tatattgcaatgccgcctctttatcgaattgatattggcaaagaagtattttacgcgcta
gatgagggtgaaaaacagggcgtactcgaccgcattaaggccgagaaaaaacgtggccaa
atacaagtaacacgttttaagggcttgggtgaaatgaaccccattcagctccgcgaaact
actatggcgcgcgacacccgccgtttggttcaactcaccgtcgaagatgccgaaagcacc
tgcgacctggtcgatctgctgctagcgaaaaaacgctccagcgatcgtcgcgcatggttg
gaagataaggggaatctggcggcggtttag

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