Gamma proteobacterium HdN1: HDN1F_30280
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Entry
HDN1F_30280 CDS
T01300
Symbol
smc
Name
(GenBank) Chromosome segregation ATPase
KO
K03529
chromosome segregation protein
Organism
gpb
Gamma proteobacterium HdN1
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gpb03036
]
HDN1F_30280 (smc)
Chromosome and associated proteins [BR:
gpb03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
HDN1F_30280 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
AAA_29
Crescentin
MscS_porin
ABC_tran
GIT_CC
Motif
Other DBs
NCBI-ProteinID:
CBL46611
UniProt:
E1VP69
LinkDB
All DBs
Position
3713792..3717292
Genome browser
AA seq
1166 aa
AA seq
DB search
MRLKSIKIAGFKSFVDPTHITFPDNLTAVVGPNGCGKSNTIDAVRWVMGESSAKNLRGES
MADVIFNGSSTRKPTVQASVELIFDNSDGSLRGEYINYAEISIRRVATRDGQSQYFLNGT
KCRRKDITDIFLGTGLGPRSYAIIEQGMISRLIEAKPEDLRIFIEEAAGISKYKERRKET
ESRMQRTRENLDRLEDIREELGRQLQHLERQAAAAEKYRQYREEERLLKAQLQVMRYQRF
HGGISERETAIRDLETRFEARVADQRNADAEIERLRDVHTEISDQLNEVQARYYGLGAEI
ARIEQTLHHTKERNQQLRTDLQEAMLAARTAESQQQADEEKLEDITGRLLELEPEQELAE
ARSEEAANALADSEEALQRWQHDWEQFNQRASAPQQRAHVEQSRIQHLEQSVRRLQERIE
RLQREQETLDAGPLQIEVEALESRCADAEDEHESLQAQLQETQDAIRQQRDTNGRTSNEL
DAAKSQLNTLRGRHASLLALQQAARGDQHEIRWLEQRGLASNARLAQQINVESGWERAVE
TVLGDCLQAVCVDQLANLPEFFEGFEHGKLSFASAALSSDVATPKRESLAARVSGNHVAL
HLLQGVYAANDLAAALALQPQLNSGESVITREGIWLGRDWLKVQRQDQAGLGVLARQKDL
EETQAQLELLDEQVETLNEQLQNGRDQLREHEDQREAVQRELTAAHRSVMDLKAQRSAKE
VRLEQLTMRSERIQRERDESAQQYESEREEIALARAAHAEAMDTMSQDADQREAMQGQRE
SLRNAVDTARSAARECSEALHRFALEAGSLRAQETSTRQGLDRLRQQLDAFDERREHIEE
QLAQGDTPSIELQESLEDHLNRRLSVEQELGDTRRKSENCEHELRATERRRQEAERAAQE
VRSELERQRLQWQGLQIERKTVLDQLAETSFQLEEVLSTLPPEANEVQWQQELERTANRI
SRLGAINLAAIDEFHAQSERKEYLDAQHKDLIEALSTLENAIRKIDRETRERFQETFDKV
NRGLQTLFPKVFGGGSAYLELTGEDLLDTGVAIMARPPGKKNSTIHLLSGGEKALTAIAL
VFSIFQLNPAPFCMLDEVDAPLDDANVGRYSRMVEEMSSQVQFIYITHNKIAMEMAHQLL
GVTMHEPGVSRLVSVDVEQAAALAAL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctaaaaagcataaaaatcgccggattcaaatcgtttgttgatccaactcacatc
acctttcctgataacctaaccgccgttgtcgggccgaatggctgtggaaaatccaatacc
atcgacgcggttcgttgggtgatgggggagtcatccgccaaaaacctgcgcggcgaatcc
atggccgacgttatctttaacggttccagcacccgcaagcctacggtacaggcctcggtg
gaactgatttttgacaatagcgacggcagcctgcgcggcgaatacatcaactacgccgaa
atttcgatacgccgtgttgccactcgcgatggtcagtctcagtattttttgaacggcact
aaatgccgtcgtaaagacattaccgatatctttttgggcacagggcttgggccgcgtagc
tacgccattatcgaacaaggcatgatctctcgcctgatcgaagcaaaacccgaagatttg
cggatttttatcgaagaagccgccggcatctccaaatacaaagagcgccgtaaagaaacc
gaaagccggatgcagcgcacccgcgaaaacctcgaccgcctcgaagacatccgcgaagaa
ctcgggcgccaactccagcacttggaacgccaggctgcagctgctgaaaaataccgccaa
taccgcgaagaagagcgcctactcaaagcgcaactacaagtgatgcgctaccagcgtttt
catggcggtataagcgagcgtgaaactgcgatccgtgatcttgaaactcgctttgaagcc
cgcgttgccgaccaacgcaacgccgatgccgaaatcgagcgcctgcgcgatgtacacacg
gaaatcagcgatcagctcaatgaagttcaggctcgctactacggcttaggcgctgaaatc
gcccgtatcgaacagaccctacatcataccaaagaacgcaaccagcagcttcgcaccgac
ctgcaagaagcgatgctggccgcacgaaccgccgaatcccagcagcaagccgatgaagaa
aaacttgaagacatcaccggccgcctgctcgaactggaaccagaacaagagctcgccgaa
gcccgctctgaagaagccgccaacgcgcttgccgactcagaggaagcgttacagcgctgg
cagcacgattgggaacagttcaatcagcgcgccagcgccccgcagcagcgtgcccatgta
gagcaatcacgtatccagcacttggaacaatccgtccgccgcctgcaggaacgtatcgaa
cgcctacagcgcgaacaggaaacgctagatgcaggcccgctgcaaatcgaagtcgaggcg
cttgaaagccgctgtgctgatgccgaagacgagcacgaatcgttacaagcacagctacag
gaaacgcaagacgcaatacgccaacagcgcgacaccaacggccgcacaagtaacgagtta
gatgcggcaaaaagccagctcaacactttgcgcggccgacatgcgtcgttgcttgccttg
cagcaagcggcgcgtggcgatcaacatgaaattcgttggttggagcagcgtggccttgca
tccaatgcacggcttgcacagcagattaacgttgagagtgggtgggagagggcggtagaa
accgtacttggcgactgcctgcaagctgtttgcgtcgaccaactcgccaaccttcccgaa
tttttcgaaggctttgaacacggcaaactcagttttgccagtgctgcgctatcttccgat
gtcgctacacctaagcgtgaatctcttgcggcgcgcgtgagcggcaatcacgtggcgcta
catttgttgcaaggcgtttatgcggcgaacgacctcgccgcagcgcttgccctacagccc
cagcttaattccggcgaatcggtcattacccgcgaaggcatctggctggggcgagactgg
ctaaaagttcaacgccaagatcaagcagggctaggcgtattggcgcgccagaaagacttg
gaagaaacccaagcgcagctggaactgctagacgagcaagtagaaacgctgaacgagcag
ctgcaaaacggccgcgatcagctgcgcgaacatgaagatcagcgcgaagccgtgcagcgt
gaacttaccgcagcccaccgcagcgtgatggacctgaaagcgcagcgctccgcaaaggaa
gtgcgtcttgagcagctcaccatgcgcagcgagcgaatccagcgtgaacgggatgagagc
gcgcaacagtacgagagcgagcgcgaagaaatcgcactggcgcgcgccgcccacgcggaa
gccatggataccatgtcgcaagatgccgaccagcgagaggccatgcagggccagcgtgaa
agcctgcgtaacgcggtagatactgcgcgatcggcagcgcgtgaatgctccgaggcgcta
catcggttcgcgcttgaggctggttcgttgcgcgcacaagaaacctctacccgccaaggc
ttggatcgcttgcgccagcaattagacgccttcgacgaacgccgcgaacacattgaagaa
cagctcgcgcagggtgatacgccgagcatcgagcttcaagaatcactcgaagatcaccta
aatcggcgccttagcgtggagcaggaattaggagacacgcgccggaaatccgaaaactgc
gagcatgagcttcgcgccaccgagcgccgccgtcaggaagcagaacgtgcagcgcaggag
gtgcgttcggagttggagcgccagcgcctgcagtggcagggcctgcagattgaacgaaaa
accgtattagatcagcttgcggaaaccagcttccagcttgaagaagtactctccacgctt
ccgccagaagccaatgaagtgcagtggcagcaagagttggagcgcactgcaaaccgcatc
agtcgtttaggtgccatcaatctggccgcaattgatgaatttcacgcccagtcggagcgc
aaggaatatctcgacgcccagcacaaagaccttatagaagccttaagcacactggaaaac
gcgatccgtaaaatcgaccgcgaaacccgcgaacgctttcaggaaaccttcgataaagtc
aatcgcggcttgcaaacgctatttcccaaggtgtttggcggtggtagcgcttacttagag
ctgaccggagaagatttgctggataccggcgttgcaatcatggcccgcccgcccggcaaa
aagaacagcaccatccacttgctatcgggtggcgagaaagcgctgacggcgatcgcgctg
gtgttttctatttttcagctgaatccagcccctttttgcatgttggacgaagtcgatgcg
ccgctagacgacgccaacgttgggcgttattcgcgtatggtagaagaaatgtccagccaa
gtgcagtttatctatatcacgcacaataaaattgcgatggaaatggcacaccagttgctt
ggggttacaatgcatgagcccggtgtatctcgtttggtgtccgtagacgtagaacaagcg
gccgcactggccgctttataa
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