Gamma proteobacterium HdN1: HDN1F_30400
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Entry
HDN1F_30400 CDS
T01300
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00071
Fatty acid degradation
gpb00280
Valine, leucine and isoleucine degradation
gpb00310
Lysine degradation
gpb00362
Benzoate degradation
gpb00380
Tryptophan metabolism
gpb00410
beta-Alanine metabolism
gpb00640
Propanoate metabolism
gpb00650
Butanoate metabolism
gpb00907
Pinene, camphor and geraniol degradation
gpb00930
Caprolactam degradation
gpb01100
Metabolic pathways
gpb01110
Biosynthesis of secondary metabolites
gpb01120
Microbial metabolism in diverse environments
gpb01200
Carbon metabolism
gpb01212
Fatty acid metabolism
Module
gpb_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HDN1F_30400
00650 Butanoate metabolism
HDN1F_30400
09103 Lipid metabolism
00071 Fatty acid degradation
HDN1F_30400
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HDN1F_30400
00310 Lysine degradation
HDN1F_30400
00380 Tryptophan metabolism
HDN1F_30400
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HDN1F_30400
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HDN1F_30400
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HDN1F_30400
00930 Caprolactam degradation
HDN1F_30400
Enzymes [BR:
gpb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HDN1F_30400
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HDN1F_30400
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HDN1F_30400
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
F420_oxidored
NAD_binding_2
AlaDh_PNT_C
DUF2680
2-Hacid_dh_C
UDPG_MGDP_dh_N
SPP1_GP23-1
Motif
Other DBs
NCBI-ProteinID:
CBL46623
UniProt:
E1VP81
LinkDB
All DBs
Position
3729014..3731158
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AA seq
714 aa
AA seq
DB search
MTEAIRYEKDSDNIVVLTMDMPGQSANTMNAAFTEAFDGVLTRLEKEEKLAGVVVASAKK
TFFAGGDLNDLIKVTPENAEQFYQATNVIKGHLRRLEKLKAPVVAAINGAALGGGLEICL
ACNYRIALNDRKIKLGLPEVTLGLLPGAGGIVRMTRMLGLEAALPLLLEGKQLAPDAAKA
AGIINEIADSPEDMLAKAKAWCKANANAQQPWDQKGYKVPGGTPSTPALAQKLPIIPAFL
LNKTKGCYPAPEAILSAAVEGLQVDFDTAIKIEGRYFVSLATGQVSKNMINAFFFNLQEI
NKGASRPKGVPVKPVKKVGILGAGMMGAGIAYVSAMSGIEVVLKDISDENAQKGKDYSVK
LLAKRVSKGQMTQEKADGILAKIKPTGNAADLAGCDLVVEAVFEKRELKASVTKEAEAVM
DANGTFASNTSSLPITGLAEASVRPEKFIGLHFFSPVDKMPLVEIICGKKTSQETLAHAL
DYVLQIKKTPIVVNDARGFFTTRVIGTYVNEGLRLLAEGAAASSIEMAAARAGFPIGTLA
ISDELNFTTMRNIRLQAEKDLAAEGKSLPADDPSKIILDTMIDKLGRTGKLGGAGFYEYP
QAGKKHLWSGLKELFNKADASIPFEDMGDRFLFIQSLEAVRCMEEGVIERVADANIGSIM
GIGFPPWTGGVIQFINGYGLRKFVARAQELAARYGERFNPPALLVEKAEKGETF
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagcgattcgttacgaaaaagatagcgacaatatcgttgtgctcaccatggat
atgcccggccagtctgccaacaccatgaatgctgcgtttacggaagcgttcgatggcgtg
ctgacgcgtttggaaaaagaagaaaaactcgcaggcgttgtagttgcctctgcgaaaaaa
accttttttgcgggtggtgaccttaacgatctgattaaggtaacgccggagaatgcagag
caattttatcaagccacgaacgtaattaaggggcacctgcgccgcctcgaaaaattgaaa
gcgccggtagttgcagcaatcaatggtgcagcactcggtggcggccttgagatttgcctt
gcctgcaattatcggattgcattaaacgaccggaaaatcaagctcggcttgccagaagtg
acgctaggtctattgcctggcgctggcggtatcgtaagaatgacccgtatgctcggccta
gaagctgctttacctcttctgttggaaggaaagcagttggctccggacgcagcgaaagcg
gcaggcattatcaatgaaatcgccgatagcccagaagacatgctggccaaggcaaaagcg
tggtgcaaggccaatgcgaatgcacagcagccttgggatcagaagggctacaaagttccg
ggtggcacgccatctacgcctgcactcgcgcagaagctgccgattatccccgcgtttttg
ctgaacaaaaccaagggctgctaccctgcacctgaagcaattttaagtgctgcggttgaa
ggcttgcaggtggatttcgatacggcgattaaaattgaagggcgctactttgtgtcgctt
gccacggggcaagtcagcaaaaatatgatcaatgcctttttctttaaccttcaggaaatc
aataaaggcgcaagccgcccgaaaggtgtgcctgtaaagcctgtgaaaaaggttggtatt
ttgggcgcgggcatgatgggtgcggggatcgcttacgtttctgcgatgtcgggtattgag
gttgtgctcaaagatatatccgatgagaatgcgcagaagggcaaggattattcggtgaag
ttgttggcgaagcgtgtttcgaaagggcagatgacccaagaaaaagccgacggtattcta
gcgaagatcaagcctaccggaaatgctgctgatctggcaggttgcgatttagtggtggag
gcggtatttgagaagcgcgagctgaaggcgagcgttaccaaagaagctgaggcggtgatg
gatgccaatggcacctttgcatcgaacacttccagcctccccattaccggccttgcggaa
gcatcggttcgccctgagaagtttatcggcctgcactttttctctcctgtggacaaaatg
ccgctggtggaaattatttgcggcaagaaaacttcgcaagaaaccttggcgcacgcgctg
gattatgtgctgcaaatcaagaaaacaccgatcgtggtcaatgatgcgcgcgggttcttt
acgacgcgcgtaatcggtacctatgtcaacgagggcttgcgtttgttggcggaaggtgct
gctgcatcgtccattgaaatggctgctgcgcgcgcgggctttccaattgggacgcttgcg
attagcgatgagctgaatttcaccacgatgcggaatatccgcctgcaagccgaaaaagat
ttggctgcggaaggaaaatcgctgccggccgatgatccttctaagatcattcttgacacc
atgattgacaagctcggccgtacaggaaagctaggtggggcaggtttctatgaatatccg
caagcgggcaagaaacatctctggtcgggcctgaaggagctgttcaataaggcagatgcg
agcattccttttgaggatatgggagatcggttcctgtttattcagtcattggaagcagtg
cgctgcatggaagaaggtgtaattgagcgcgttgctgatgccaatattggttcgattatg
gggattggtttcccgccgtggactggtggcgttatccagtttattaacggatatgggttg
cgtaagtttgtagcgcgtgcccaagagttggcggcgcgttacggtgagcgctttaatccg
ccggcgctgttggtggagaaagcggagaagggagagactttttag
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