Gamma proteobacterium HdN1: HDN1F_32040
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Entry
HDN1F_32040 CDS
T01300
Name
(GenBank) Transcriptional regulator, AraC family
Organism
gpb
Gamma proteobacterium HdN1
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Gene cluster
GFIT
Motif
Pfam:
Arabinose_bd
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
CBL46787
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Position
3909094..3910092
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AA seq
332 aa
AA seq
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MSELRDSVVLVRLAYQGMLAKGIDAGEVLRRIGMNEGHLGVQDLRTPHSGQARFWSAVEE
VSGDSDIGLHLGEAVPLYRGQVLEYLFLSSPTFGDGLRRALNYQRLLSDAVHARLDQDEI
GYFLSHKAFGRDVRHLVEAVFVGVVKFFRYVTEDSFKPLLIEFAHDSGASATEYARIFGC
TVRFGCVENRLYFSPQVLEIPSLHAESELLRLHEQVASEHVARLEKQDFVSSVNRLIGEL
LESGHADLETVAERLAIKPRSLRTRLSEAETNFNQLLADYRCNLAKRLLAKTDESIDEIV
YLTGFSEPSTFYRAFKRWVGLTPIEYRRSKRA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagttgcgagactctgtggtactggtgcgacttgcctaccaaggcatgcttgcc
aaagggattgatgcaggggaagtgttgcgaaggatcggcatgaatgaaggccatttaggc
gttcaagacttgcgcacaccccattcaggccaggcacgcttctggagtgccgttgaagaa
gtatctggcgattcagacatcggccttcatcttggcgaggcagttccgctctaccgtggc
caagtacttgaatacctctttttaagcagcccaacctttggcgatggtttgcgcagggcg
ctcaactaccaacgcctactgtccgatgcggtgcatgcacgcctcgatcaggacgagatt
ggctattttctatcccacaaggcttttggccgcgatgttcgccacctcgttgaagcggtt
tttgtgggcgttgtgaagttttttcgttacgttacggaagatagctttaagcctcttttg
attgaatttgcccacgacagcggtgcaagtgctactgaatacgcgcggatttttggttgc
actgttcgctttgggtgcgttgaaaatcggctttatttttccccacaagtgctggaaata
ccttcccttcacgcggaatctgaattgctcaggctgcacgaacaagtggcgagtgaacac
gttgcgcggctcgaaaaacaagatttcgtctccagcgtcaatcgcctgatcggtgagctg
ctcgaatctggccacgccgacctcgaaaccgtagccgagcgcttagccatcaagccgcgt
agcttacgcactcgcttatccgaagcagaaaccaattttaaccagctactggccgattat
cgctgcaaccttgccaaacgcctgctcgccaaaaccgacgaatcaattgatgaaatcgtc
tatctgaccggcttttccgaacccagcaccttttacagagcgtttaagcgctgggtgggg
cttaccccaatcgaatatcggcgcagcaaacgcgcctag
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