Gamma proteobacterium HdN1: HDN1F_32140
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Entry
HDN1F_32140 CDS
T01300
Name
(GenBank) Hypothetical protein
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
gpb
Gamma proteobacterium HdN1
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gpb03009
]
HDN1F_32140
03016 Transfer RNA biogenesis [BR:
gpb03016
]
HDN1F_32140
Ribosome biogenesis [BR:
gpb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HDN1F_32140
Transfer RNA biogenesis [BR:
gpb03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
HDN1F_32140
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
CBL46797
LinkDB
All DBs
Position
complement(3922173..3923870)
Genome browser
AA seq
565 aa
AA seq
DB search
MVHNSALSPRTWRYSMDRKPNRPRDGAPARPKSGNPTDGPRAGGKARRGDGAPRDGQAPR
ERRPHGDRPARDGDRPQRDRNFEGQRRGHGDQNRGERHSGDQNRSERWEGRGQGRGDRQG
NDQNRGERWEGRSGDDRGRDRNGPPRGDRNGPPNRGERKGGFGQGPRAQQGEGFARRPRD
ERPKEFDDDFGNRMDYKPKQRPAGRAGARGGDRYTSPSFRDGGRGREGGSFRDSGFRDGG
GYRDSGYRDGGYSDGEPRTSEGRKSEGPRFIDKSSREGRKQSAAPRKEKYQVWNKELPPS
EAGANPDRSTLKLSNKADPNERKIYGVNASRAFFEQRPSDIIRAYFTEAVARQHFNELMK
FLASEKLAYHLVTSEDMERITESTHHEGVCLLVRDPGAESFFHWIETTPPPAEEPHCILA
LEDLGNPHNIGAILRVAAHFGVSSIVVRDASLARSGAALRTAEGGGEHVRLLEADDFSRM
LAACRREGFTVVSTSSHEGTSLFAAPLPARVVLLIGQESTGLSSSLQEGSDLKISIPGTK
NVESLNVSVAAGILLAEYWRNHASN
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
ttggtgcacaatagcgcactttccccccgcacctggagatactcaatggatcgcaagcca
aatcgccctcgcgatggcgcccccgcacgcccgaaatctggcaaccctacggacggccca
cgcgctggcggcaaagctcggcgcggcgacggtgccccacgtgacggccaagcaccacgc
gaacgcaggccacacggcgatcgccccgcgcgtgatggcgaccggccgcaacgtgatcgc
aactttgaaggtcagagacgcgggcacggcgaccaaaaccgaggcgagcgtcatagcggc
gaccaaaacaggagtgaacgctgggaagggcgcggccaaggccgtggcgatcggcaaggc
aacgaccaaaaccgaggcgaacgctgggaagggcgcagtggagacgatcgcggccgcgac
cgtaacggcccacctagaggcgaccgtaatggcccacccaaccgaggtgaacgcaaaggt
ggctttggacaaggcccacgtgcgcaacaaggtgaaggtttcgcacgccgaccacgcgac
gaacgcccaaaggagtttgacgacgacttcggcaatcgcatggactacaagccaaagcaa
cgcccagcaggccgtgccggagctcgtggcggcgaccgctatacgagcccctcgttccgt
gacggtggccgtggacgcgaaggcggcagttttcgagacagtggttttcgagatggcggc
ggctatagagacagcggctatcgcgacggcggctactccgacggcgaaccacgcacgtcc
gaaggccgtaaatcggaaggcccacgctttattgacaagagttcgcgcgaaggcagaaag
caatctgctgccccccgcaaagaaaaatatcaggtttggaacaaagaactgccaccttca
gaagctggtgcaaacccagaccgctctacgctgaagctctccaacaaggcggatccaaat
gagcgcaaaatctacggcgtgaacgccagccgtgcgttctttgaacagcgcccaagcgac
atcattcgcgcctactttacggaagcggtggcccgccagcacttcaacgaactgatgaaa
ttcttggccagcgaaaagcttgcctaccacctagtcaccagtgaagatatggagcgcatc
accgaatccacccaccacgaaggcgtttgcctattggtgcgcgacccgggcgccgaatca
ttctttcattggattgaaaccaccccacctcccgcggaagagccacactgcattcttgcg
ctagaagatcttggcaacccgcacaacatcggcgcaatcctacgcgtggcagcccatttc
ggagtgagcagcattgtggttcgcgacgcatcgcttgcacgttcaggcgcagcgcttcgc
acggcggaaggcggcggcgaacatgttcggcttctggaagcggatgatttcagccgcatg
ctggctgcatgtcggcgggaaggatttaccgtggtttcaacttctagccacgaaggcacc
agcctattcgctgcgccgctacccgcacgcgtagtgcttttgatcggccaagaaagcacc
ggcctgtcgagctcactgcaagaaggcagtgacttgaaaatctctattcctggaaccaag
aacgtggaaagcctcaatgtcagcgtagcggcaggaatcctgctggctgagtactggcgc
aaccacgcgtcaaactaa
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