Gamma proteobacterium HdN1: HDN1F_32780
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Entry
HDN1F_32780 CDS
T01300
Symbol
ruvB
Name
(GenBank) Holliday junction resolvasome helicase subunit
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HDN1F_32780 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpb03400
]
HDN1F_32780 (ruvB)
Enzymes [BR:
gpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HDN1F_32780 (ruvB)
DNA repair and recombination proteins [BR:
gpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HDN1F_32780 (ruvB)
RecFOR pathway proteins
HDN1F_32780 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_16
AAA_3
TIP49
AAA_14
nSTAND3
RNA_helicase
ABC_tran
Rad17
AAA_17
NTPase_1
NB-ARC
AAA_28
AAA_18
Sigma54_activ_2
Bac_DnaA
AAA_24
Motif
Other DBs
NCBI-ProteinID:
CBL46861
UniProt:
E1VPW9
LinkDB
All DBs
Position
3999494..4000513
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AA seq
339 aa
AA seq
DB search
MERLISPHDKKEDGQDRAIRPTRLADYTGQVSVREQMEIFIAAARGRQEALDHTLIFGPP
GLGKTTLANIIANEMGSSLKSTSGPVLERAGDLAALLTNLERGDVLFIDEIHRLSPVVEE
ILYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLVGATTRAGLLTSPLRDRFGIVQRLEFY
NVEELTSIVSRAAGILGVPIHSGGAIEIARRSRGTPRIANRLLRRVRDYCQVKGDGTISQ
QQSARALDLLKVDAFGFDTMDRRLLLAIIEKFDGGPVGIDSLGAAISEESGTLEDVVEPY
LIQQGFLLRTARGRIATRQAYLHFGLPAPRRDENSGVGD
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggaacgattgatttccccgcacgataaaaaggaagacgggcaagaccgcgcaattcga
ccgactcgactcgccgactacacggggcaggtgagtgtccgcgaacaaatggaaattttc
attgcagctgcccgtggccgccaagaagcactcgaccacacccttattttcggcccgccg
ggtcttggtaaaaccacactagcgaacattatcgccaatgaaatgggcagcagcctgaaa
agcacctctgggcctgtgctggaacgggcaggcgatcttgccgcacttcttaccaatctg
gagcgtggcgacgtactctttattgacgaaattcaccgcttaagtccagtagttgaagaa
attctttatccagcgatggaagattaccagttggatattatgattggtgaaggccccgca
gcgcgttcgatcaaaattgatctacccccttttacgctggtaggtgcgaccacgcgtgct
gggctattaacctcaccgttgcgggatcgttttggtatcgtgcagcggctggaattttac
aacgtagaagaactcacgagcatcgtctctcgtgctgccggtattttgggggtgccgatc
cattctggtggcgcgatagaaattgcgcgtcgcagccgaggtactccgcgcattgcaaac
cggctgttgcgacgcgttcgtgattattgtcaggtaaaaggtgatggcacaatctcgcaa
caacaatcggcgcgcgccttagatctgttaaaagtagatgcgtttggatttgatacgatg
gatcgccgtctgttgcttgccattatcgaaaaattcgacggcggccccgtgggaattgat
agtttaggtgcggccattagcgaagaatcgggaaccttggaagacgtcgtggagccttat
ttgatacagcagggatttcttttgcgaacagcgcgaggccgaatcgcaacgaggcaggca
tacctccattttggtttgccagcgcctcgacgtgatgaaaattccggagtgggtgattga
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