Gamma proteobacterium HdN1: HDN1F_33720
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Entry
HDN1F_33720 CDS
T01300
Symbol
fadD2
Name
(GenBank) Long chain fatty-acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00061
Fatty acid biosynthesis
gpb00071
Fatty acid degradation
gpb01100
Metabolic pathways
gpb01212
Fatty acid metabolism
gpb02024
Quorum sensing
gpb04146
Peroxisome
Module
gpb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HDN1F_33720 (fadD2)
00071 Fatty acid degradation
HDN1F_33720 (fadD2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HDN1F_33720 (fadD2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
HDN1F_33720 (fadD2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gpb01004
]
HDN1F_33720 (fadD2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gpb04147
]
HDN1F_33720 (fadD2)
Enzymes [BR:
gpb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HDN1F_33720 (fadD2)
Lipid biosynthesis proteins [BR:
gpb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HDN1F_33720 (fadD2)
Exosome [BR:
gpb04147
]
Exosomal proteins
Exosomal proteins of breast milk
HDN1F_33720 (fadD2)
Exosomal proteins of breast cancer cells
HDN1F_33720 (fadD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Headcase
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
CBL46955
UniProt:
E1VQ63
LinkDB
All DBs
Position
4095620..4097278
Genome browser
AA seq
552 aa
AA seq
DB search
MEKIWADKYDAGTPLEIDTSKYSSILEVFHESCRKFADRPAYSNMGVTITYRELDALSAQ
FAAYLQNHTSLKVGDRIAVQMPNLIQYPVVVFGAMRAGMVVVNTNPMYTAREMEHQFNDS
GAKAVVALANFGNLLQEVLPKTGIKHVIITEVADMQKPLKRLLMNFVIRKIKKMVPAFHI
PQAVSFVKAMAQGKRATFKGDHKAARDDIAVLQYTGGTTGVAKGAMLTHGNLIANMLQVK
TLLTDWRDGQETIVAPLPLYHIFSFTVCCMAMMNTGSHSYLITNPRDILGFLADIGKAKF
TAFCGLNTLFVAMMNHPEFTKVDFSGLKFTVAGGMAMQVHVAEKWEKLTGCRVCEGFGMT
ETSPVVCVNPPHAIQLGTIGIPVPSTDIKLLDEEGKELGVGEPGELCVKGPQVMKGYWQR
PDATAEIMTEDGFLRTGDVAVLQPDGFLRIVDRKKDMILVSGFNVYPNEVEEVVAGHPGV
LECAAIGVPDDKSGEAVKVFVVKADQNLTKEQVIAHCRAGLTGYKVPKYVEFRTELPKSN
VGKILRRELRDH
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatctgggcagacaaatacgacgcgggcactccactggagattgacaccagc
aaatacagctccattcttgaagtttttcatgaaagttgccggaaatttgcggatcgccct
gcgtatagcaacatgggagtaacgattacttatcgcgagctggatgctctttctgcgcag
tttgccgcctacctgcaaaaccacaccagtctgaaggttggggatcgcattgcggtgcag
atgccaaatttgattcagtatcccgtggttgtgtttggggcgatgcgggccggtatggtt
gtcgtcaataccaatcccatgtataccgcgcgtgagatggagcaccagttcaacgattct
ggcgcgaaagcggtggttgcactggcgaactttggcaatttgttgcaagaagtactgcca
aaaaccggcatcaagcacgtcatcatcaccgaagttgccgacatgcagaagcctcttaag
cgccttctgatgaactttgtaattcgcaagatcaaaaaaatggtgccggcgttccatatt
cctcaggcggtgtcctttgtgaaggcgatggcgcaaggcaagcgagcaacgtttaagggt
gaccacaaagcggcgcgtgatgatattgccgttctgcaatataccggcggcacgactggc
gttgccaaaggcgcgatgctgacccacggcaacctgatcgcaaatatgctgcaggtaaaa
acactgttgaccgactggcgagacggccaagagacgattgttgcgccgctgcccctttac
catattttttcgtttaccgtttgctgtatggcgatgatgaacaccggcagccatagctac
ttgattaccaacccgcgtgatattctgggattccttgcagatattggcaaagcaaaattc
acggcattctgcggtctgaataccttgttcgtcgcgatgatgaaccaccccgaatttacc
aaagtagactttagtgggctgaaatttacggtggcaggcggtatggccatgcaggtccac
gttgcagaaaaatgggaaaaacttaccggctgtcgcgtctgcgaaggttttggtatgacg
gaaacatccccagtcgtctgtgtgaacccaccacacgcgattcagctgggtacgatcggt
attcctgtaccttctaccgacattaaattgctcgacgaagaaggcaaggaactaggcgta
ggcgaaccgggtgaactctgcgtgaaaggcccgcaagtcatgaaaggttattggcagcgc
ccagacgctactgccgagatcatgaccgaagatggcttcctaagaacgggcgacgttgca
gtgcttcaacccgatggattcctacgcatcgtcgatcgcaagaaagacatgattctggtt
tccggctttaacgtctacccgaatgaagtcgaagaagtcgttgctgggcatccaggggtg
ctggagtgtgctgccattggtgtaccggatgacaagagtggcgaggcggtaaaagtattt
gtggtcaaagccgaccagaatcttaccaaggaacaagtgatcgctcattgccgtgccggc
cttaccggctataaagtgccgaaatacgttgagttccgcacagagttaccgaaatctaac
gtgggtaaaattctgcgccgcgaattgcgcgatcattga
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