Gamma proteobacterium HdN1: HDN1F_34240
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Entry
HDN1F_34240 CDS
T01300
Name
(GenBank) Predicted acetyl-CoA carboxylase
KO
K01969
3-methylcrotonyl-CoA carboxylase beta subunit [EC:
6.4.1.4
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00280
Valine, leucine and isoleucine degradation
gpb01100
Metabolic pathways
Module
gpb_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HDN1F_34240
Enzymes [BR:
gpb01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
HDN1F_34240
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Gene cluster
GFIT
Motif
Pfam:
Carboxyl_trans
ACCA
MdcE
ECH_1
Motif
Other DBs
NCBI-ProteinID:
CBL47007
LinkDB
All DBs
Position
complement(4159844..4161451)
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AA seq
535 aa
AA seq
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MPVIKSRAITGSEEYEKNRSAMQALVDNLYEVVAKVRLGGGLNAQKKHLSRGKMLPRDRV
LNLLDPGSPFLELGTLAAHEVYGEDVPAAGIITGIGRIHGIECMIVANDPTVKGGSYYPL
TVKKHLRAQTVAEQNHLPCVYLVDSGGANLPRQDEVFPDREHFGRIFFNQARMSAMNIPQ
IAVVMGSCTAGGAYVPAMSDESIIVREQGTIFLAGPPLVKAATGEDVTAEALGGADVHCR
ISGVSDHYAENDEHALQLARQCVSHLNRMHPSVAGKRIPIAPLYAPESIYGVIPPDLKTP
FDVREAIARIVDGSELDEFKALYGTTLICGFAHILGYPVGIVANNGILFSESAQKGAHFI
ELCAQRKIPLLFLQNITGFMVGQKYENEGIAKHGAKMVTAVATANVPKLTVIIGGSFGAG
NYGMCGRAYDPRFMFMWPNARISVMGGEQAAGVLAQLKRHNIESKGHSWSADEEAEFKRP
VIKTYDHQGHPYYASARLWDDGVIDPAQTREVVGLALSATHNAPIEDTRFGVFRM
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttattaaaagccgcgccatcactggcagcgaagaatacgaaaaaaaccgcagc
gcaatgcaggcattggtagacaacctctacgaagtggttgcaaaagtgcgcttgggcggc
ggcctcaatgcacagaaaaagcatctttcccgaggcaaaatgttaccacgggatcgcgtt
ctgaatttgctcgatcctggctcgccctttcttgaactgggcaccctcgctgcgcacgag
gtctatggagaagacgttcccgctgccggcatcatcaccggcattggccgcattcacggc
atcgagtgcatgatcgttgccaacgatccaaccgtgaaaggcggcagctactacccactt
accgtcaaaaagcatctgcgcgcgcaaacggttgcggaacagaatcatcttccctgcgtt
tatttagtggattccggcggcgcaaaccttccgcgccaagatgaagtgttccccgatcgt
gagcactttgggcggattttctttaatcaggcgcgcatgtcggcgatgaatattccgcag
attgccgtggtcatgggttcgtgtaccgcaggcggcgcctacgttccggcaatgtccgac
gaaagcattatcgtgcgcgaacaaggtaccatctttctggcagggccaccgctggtaaag
gccgccaccggtgaggacgttaccgcagaagccctcggcggtgctgacgttcactgccgc
atttcaggagtttccgatcactacgccgaaaacgacgaacacgcgctgcaactggctcgt
caatgcgtcagccacttaaaccgcatgcatccaagcgttgccggaaagcgcataccgatc
gcaccgctctacgcgcccgaaagcatctacggcgtaattccgcctgatttgaaaacgccc
ttcgatgtgcgcgaagccattgcccgcatcgtggatggttccgaactggatgaattcaaa
gccctgtacggcaccacgttgatttgcggatttgcacatatcctaggttatcccgtcggc
attgttgctaacaacggcattctattctcggaatccgcacaaaaaggcgcgcattttatt
gagctttgcgcgcaaagaaaaattccgctgcttttcttgcaaaatatcaccggcttcatg
gtaggccagaaatacgagaacgaaggcatcgccaagcacggcgccaaaatggtaacggcg
gttgccactgccaacgtgccaaaactaacggtgatcatcggtggcagcttcggcgcagga
aactacggcatgtgtgggcgcgcctatgatccacgctttatgttcatgtggccgaacgca
cgcatttcggtaatgggtggcgagcaggcggcaggcgtgcttgcgcagctaaaacgccac
aacatcgaaagcaagggccattcatggtctgctgatgaagaagcagagttcaagcgcccg
gtaattaaaacctacgatcaccaaggccacccctactacgccagtgcaaggctttgggat
gacggagtgattgatccagcacaaacgcgagaagtggttgggcttgctctctctgccaca
cataacgcgcccattgaagatacgcgctttggcgtattcagaatgtag
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