Gamma proteobacterium HdN1: HDN1F_35630
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Entry
HDN1F_35630 CDS
T01300
Symbol
duS
Name
(GenBank) Dihydrouridine synthase
KO
K05541
tRNA-dihydrouridine synthase C [EC:1.-.-.-]
Organism
gpb
Gamma proteobacterium HdN1
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gpb03016
]
HDN1F_35630 (duS)
Transfer RNA biogenesis [BR:
gpb03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
HDN1F_35630 (duS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
Motif
Other DBs
NCBI-ProteinID:
CBL47146
UniProt:
E1VQQ4
LinkDB
All DBs
Position
4296988..4297929
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AA seq
313 aa
AA seq
DB search
MKSKASAPLIALAPMEGLVDAPMRAALTAMGGVDWCVTEFIRVTQSVLPTRTYQRLAPEL
EQQWKTASGTPLHVQFLGSDPEFLAANAVRAAKLGAKEIDLNFGCPAKAVNRHRGGAVLL
EEPELLNTIVTAVRAAVPEPIKVTAKMRLGYLDKSLMLDCARALDEAGAARIVVHARTKA
EGYRPPAHWHCIAQIADVVRAPVMANGEIWTVEDYLQCRRESGCNDVMLGRGLVARPDLA
LQIRTALLGEHQAPSSWDPIFAAVQVFYQHSLAQLNPTAAAGRLKSWLAHLRHTYPEASE
LYQQVRTQKVVAL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatccaaagcctcagcccccttaattgcgttagcgcccatggagggcttagtggac
gcacccatgcgcgccgccctcaccgcaatgggcggcgtagactggtgcgtaacggaattt
atcagggtcacgcaaagcgtattgccaacgcgcacttatcagcgccttgcgccagaattg
gagcagcaatggaaaaccgccagcggcacccctttgcacgttcagtttcttggttctgac
ccagaatttcttgctgctaacgcagtgcgagccgccaaattaggcgcaaaagaaatcgac
ctgaattttggctgccccgcaaaagccgtcaaccgccaccgaggtggcgcggtattatta
gaagaaccagaactgctcaacacgattgttactgcggtacgcgcggccgtgcccgaacct
ataaaagtaacggcgaagatgcgcttggggtatcttgataaatccctgatgttggactgc
gcacgcgcactggatgaagcaggcgccgcccgtatcgttgtacacgcccgcaccaaagcc
gaaggctatcgcccgcccgcgcattggcattgcattgcgcaaattgcagacgtagtgcgc
gctcctgtcatggcgaatggcgaaatctggacggtagaagattatttgcagtgccgccgt
gaatccggctgtaacgacgtcatgttagggcgcggcttggtggcgcgccccgatcttgct
ctgcaaatccgcaccgcacttttaggagagcatcaagcgccatccagctgggatcctatt
tttgcggcggtgcaggtgttctatcaacactctcttgcgcaattaaaccccacggcagcg
gcaggccgcctgaaaagctggcttgcacatctgcgacatacttatccagaagccagcgaa
ctctaccagcaggtacgcacgcagaaggtagtggcgctttag
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