Gamma proteobacterium HdN1: HDN1F_36980
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Entry
HDN1F_36980 CDS
T01300
Name
(GenBank) Rhs family protein
Organism
gpb
Gamma proteobacterium HdN1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF11
DUF6531
RHS
Ig_GEX2_N
DUF7619
DUF2157
Motif
Other DBs
NCBI-ProteinID:
CBL47281
LinkDB
All DBs
Position
complement(4458884..4463677)
Genome browser
AA seq
1597 aa
AA seq
DB search
MSAALLLGHSGLLNAACNVSNAKVHRDIDISACIQICDAGIPSNGFVCTHSERKNYCLAE
CAGATAQCPKGNPIDILTGAKMQQEVDYSTGGDFPLEIRRSYNSLSSEISPEFGAKWAGF
GEAKIVSYLDAGKRYAVVQRPTGETWKYVWSGEDGTTQPTQSGSGNALTAMEYDAERDIY
ELSLSDGSVEYYHFKQSELDSNKRFESKLWWKEDAAFRKHTYVYNATGQLASVADDFGNA
LGFAYYPDGKIQAITAPGDKTFSYEYKIASVVDKVTSVVTEVDILSKVCFSGASGAESSC
KEYLYEDTRFPLALTGIVDENGNRFATFAYNSQGLAVSTEHAGGADRMEVLEYRYGSGTF
SPTSLYTPLSLGDRVVRLKNANGLETEYRFGYSGPEGGFNAQLKSVTGDATLNCGATNST
YSYDAKGFQDKITDGRGFVTDLDHNAKGQEIRRTEAVGQPEQRTTETDWYPGGTIKEIRA
PGKTTRFTYTQGDGLGRLASRTEIDTTTHSAPYATQGLSRTWSYSYTYHDAPANLKVATV
TVDGPRADVNDTTVQHVNPAGRIYRVEQQNGTGAPLVNEVTEFSAEGLPKTIVDPNGTVT
QLAYTPRGWLKSRTVVTPQGSVTTTYAYDLVGQVTQVTLPTGTQLNYQYDAAHRLQAIST
QDNERIEYELTAQGAHRIERILSSSGSLRRLVHQEFDDLGRLWKSFGVQDQVLETNQYDE
NGNLVRITDAYQQPILRAFDGLNRLRTQTERDTGATQYEYNAQDQLVSITDPNGLTTTWV
VDGFGRKIQETSPDRGTTVYRYDLADNLIQKTDARNSVTKYSYDALNRLTEIQYPASAQD
NVSLKYDETSLPTANGSIANKGKGRLTSAIVANGDKIQWAYDALGNITNDVRVQEGKTFQ
TTYTYNVAGQLATLTYPSGRELSYGYDNKGRIHQLRSRENSSKSWTTLANNLSYEPFGPL
TGFTWGNGLTETLSYDTHYQPETIQTRSGSSDVRNLQYGFNLANELDHLTDAKTPARSQL
FSYDPNGRLSQAQGQYGTLAYQYDLTGNRVSQAQTNASDGQNFTESYQYPANTHRLTQVN
ASGQGGQNRSFQYSAAGNLTQDESYTYVYNDANRLTKIFSGPAIVAEYRYNHLGERVSKT
ADGKTIQFIYGANHQLLAEHHQDGTPIRDYVYLGNKLLAMVDADTTTNPDTGTKADLAIT
LKGATGNSVKQPDGRYQVTYKVNVQNAGGSAAENVVLTNTFPATEVNLVSYTASQGTCTE
DAGSCDLGTISAGQTATVTLIANKGKKAKENFSASVTTSSEESNTDNNSATAAFGGAFGL
WIMAFLAAMLGLRSLTAKRALNRKNTISTACLLLCGLSLMGANTSQAEQIYYVHSDHLNT
PTLVTDSNKTVVWEGVRKPFGEIEEITNTVRQPIRFPGQYFDGETGLSYNLMRDYDARVG
RYVQSDPMGLAGGVSTYGYGYQNPITNYDPDGEMSIALPGLGLGLGLGLIYCYITPSCLS
AWQDMASWNGGNASGPAPYDHADEGEALYFTPDPFGGNCEGLKRAIQILRAQIAWRRTDL
NPISPSYRTHVMRINILKAALEKLEKAHENICGPCPK
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgccgcactgcttctcggccattccggccttttgaatgcggcctgcaacgtctcg
aacgccaaggttcatcgcgatatcgatatcagtgcttgtatccagatttgcgatgcgggc
attcccagcaatggctttgtgtgcacccactctgagcgtaaaaactactgtcttgctgag
tgcgcgggcgctaccgctcagtgccccaaaggcaaccccattgatatcctcaccggcgca
aagatgcagcaagaagtggattattccaccggtggcgattttccgctggagatccggcgc
agctataacagcctctcctccgagatcagtcccgagtttggcgctaaatgggcaggcttt
ggcgaggctaaaatcgtaagctacctagatgctggcaagcgttatgccgttgtacagcgg
ccgaccggcgaaacttggaaatacgtctggagcggtgaagacggcacgacccagcccact
caaagtggcagcggcaatgcgttgacagccatggagtacgacgctgagcgtgatatttac
gaactctccttgagtgatggttcagtagaatattatcatttcaaacagagcgaactcgac
agtaacaagcgattcgagtcgaaactctggtggaaggaagacgcagcctttcgaaaacac
acctacgtttataacgccacaggtcaactggcctccgttgcggatgattttggtaacgct
ctcggatttgcctactatccggatggaaaaattcaagcgatcaccgcgccgggcgataaa
accttctcgtacgaatacaaaatcgcgtcggtagtagacaaggtgacgtcggtcgtcacg
gaagtggacattttatccaaggtctgcttttctggcgcaagcggcgcagaaagcagctgc
aaggaatacctctacgaagacacccggttccccttagccctgaccggaattgtggatgaa
aacggtaaccgctttgcgacctttgcctataacagtcaagggcttgccgtctccaccgag
catgccgggggcgctgatcggatggaggtgctggaataccggtatggaagcggcactttt
tcgcctacctccctctatacgcccttgagcctaggggatcgggtcgttcgcctgaaaaac
gccaacgggctcgaaacggaatatcgctttggttacagcggcccagaaggcgggtttaac
gcccagctcaagtccgtcaccggcgatgctacgctcaactgcggtgccaccaacagcacc
tatagttacgacgcaaaaggcttccaggacaaaattaccgatggtcgcggatttgtgacc
gaccttgatcataacgccaagggtcaggaaatccgccggaccgaagcggtcggccagccc
gaacagcgcacaacagaaaccgactggtatcccggcggcaccatcaaggaaatccgcgca
ccgggtaaaaccacacgctttacgtacactcaaggtgacggccttggcaggctcgcaagc
cgtaccgaaatcgacacgaccactcacagtgcgccctatgcaacgcaagggctcagccgc
acttggagttattcttacacctatcatgatgcgcctgccaacctgaaggttgccaccgta
acggtcgatgggccgcgcgcggatgtgaacgataccactgttcaacacgtcaacccagca
ggccgaatctatcgggttgaacagcagaacggtactggtgcgccgctggtgaatgaggtt
accgaattctctgccgagggattgcccaaaacgatcgtcgatcctaatggaaccgtgact
cagctagcctacaccccgcgcggctggcttaaaagccgcactgtcgtcacgccccaaggc
agtgtcaccaccacctacgcctatgacctagtcgggcaagtgacgcaagttactttaccc
accggcactcaactgaattatcagtacgatgccgcgcatcgcctgcaagccatctccaca
caagataacgagcgtattgaatacgagctcaccgctcaaggcgcccatcgtatcgaacgt
atcctctccagcagcggcagcttgcgcagactcgtccatcaggaatttgacgatctggga
cggctctggaaaagcttcggtgttcaggatcaagtacttgaaaccaaccaatacgacgaa
aacggcaacctcgttcggatcaccgatgcctatcagcaacccattctccgcgccttcgat
gggctcaaccgcctacgcactcaaaccgagcgcgataccggtgcgacccagtacgaatat
aacgcgcaagatcagcttgtctcgatcaccgatcccaacggcttaaccaccacatgggta
gtagatggctttggccgaaaaatccaagaaaccagcccagatcgcggcactacagtgtat
cgctacgatctggccgataacctgatccagaaaaccgacgcccgcaacagcgttacaaaa
tacagctatgacgccctcaatcgcctgaccgaaattcaatatccggccagtgcgcaagac
aacgtcagcctaaaatacgacgaaaccagtcttccaacggcaaatggttccattgccaac
aaaggaaaaggccgcttaacttcggcaatcgttgccaacggcgacaaaatccaatgggcc
tacgatgcacttggtaatatcacgaatgacgtgcgggtacaggaaggcaaaaccttccaa
accacctacacgtataacgtcgcaggccagcttgcaacgctcacctaccccagcggacga
gagcttagctatggctacgacaataaaggacgcatccaccaactccgcagccgcgaaaac
agcagtaaaagctggacgaccctcgcaaataacctaagctacgaacccttcggccccctt
accggatttacttggggcaatggcctaacggaaactctcagctacgacacccactaccag
ccggaaaccatccagacccgttcaggcagcagcgacgttcgcaacctgcaatacggcttt
aacctcgccaacgaactggatcacctgaccgatgcgaaaaccccagctcgcagccaactc
tttagctacgatcccaacgggcgtttgagccaagcgcaaggccagtacggcacgctagcg
tatcagtacgacctcaccggcaaccgcgtatcgcaagcgcaaaccaacgcaagcgacggc
caaaactttaccgaaagctaccaatatccggccaacactcaccgccttacccaagtgaac
gccagtgggcagggtggccagaaccgtagcttccagtacagcgccgccggtaacctcacg
caagatgagagttatacctacgtttataacgatgcgaatcgcctcaccaaaatcttcagc
ggccctgccattgtcgcagaatatcgttacaaccacctaggcgagcgggtctctaaaacc
gccgacggaaaaaccatacaatttatctatggcgccaatcaccaactgctggccgaacat
catcaggatggcacgccgattcgcgattatgtttatctcggaaataaattactggcaatg
gtggatgccgatactacaactaatccagacacaggcacaaaagccgatcttgcgattacc
ttgaaaggcgccaccggaaattccgtgaaacagccggatggtcgttatcaggtcacgtac
aaggtcaatgtccagaacgccggtggcagcgctgctgaaaatgtcgtgctcaccaatacc
ttccctgcaacagaagtgaacttggtgagctacacggccagccaaggcacttgcaccgaa
gacgccggcagttgtgatctcggcaccatcagcgcgggccaaaccgcaacggtgaccctg
attgccaacaaagggaaaaaagccaaagaaaacttcagtgcgagcgttacaaccagctct
gaagaaagcaacaccgataacaacagcgcaacggctgcgtttggtggcgccttcggcctc
tggataatggccttcctcgctgctatgctgggcttgcgtagccttactgccaagcgcgct
ctcaaccgtaaaaacacgatcagtacagcgtgcttgttactctgcggcctgagcctgatg
ggcgctaacaccagccaagccgagcagatttattacgtccacagcgatcacttaaacacg
ccgacactggtcacggattcgaataaaaccgtggtgtgggaaggggtgagaaagccgttt
ggtgagatagaggaaattaccaataccgtacgccagccgattcggtttccggggcagtat
tttgatggggagacggggctaagttacaacttgatgcgggattatgatgcacgggtgggg
cggtatgtgcagagtgatccgatggggttagcgggtggggttagtacgtatgggtatggg
tatcagaatccgattacgaattatgaccctgatggagaaatgtcgatagccttgcctgga
ttggggttgggtctagggcttggtctgatttattgctatatcacgccatcctgtctttca
gcttggcaagatatggcttcatggaatggtggtaatgcgagcggaccggcgccttatgac
catgcagatgaaggtgaagcgttgtatttcactcctgatccctttggtggaaactgtgag
ggattgaagcgtgctattcagatattgcgtgctcaaattgcatggagaaggactgacttg
aatccgatttctcccagttatcgcacccatgtgatgcgcataaatattttaaaagccgca
ctagaaaaacttgaaaaagcgcatgagaacatttgtggcccttgcccaaagtag
DBGET
integrated database retrieval system
