Gordonia pseudamarae: GII33_00015
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Entry
GII33_00015 CDS
T07482
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
gpd
Gordonia pseudamarae
Pathway
gpd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GII33_00015 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpd03400
]
GII33_00015 (recF)
DNA repair and recombination proteins [BR:
gpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GII33_00015 (recF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
RsgA_GTPase
ABC_tran
Arabino_trans_N
SbcC_Walker_B
AAA_29
DUF2813
Motif
Other DBs
NCBI-ProteinID:
QHN24604
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Position
3470..4678
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AA seq
402 aa
AA seq
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MYVRHLSMRDFRSWRSLEVDLAAETTIFVGRNGFGKTNILEALYYLTNLRSHRVSTDAPL
VHHGAEAAVIAATVEHNGRELTAELTVNASGANKARINQSPARRPRELIGILRSVMFAPE
DLLLVRGDPSDRRRFVDEIVAQQGPLQVAARADYDKVLRQRTALLKTAGAAMRRGGSEAA
SVISTLDVWDAQLADLGARITAARIDVLAALRPHVVAAYTAIAPHSRPADLRYRPAAGPH
LLPGPGSPAVVADIREHLLAGLAELRGKEIERGVCLVGPHRDDIDVILGEQVAKGFASHG
ESWSLALSLRLGSVELLRADGIEPVIMLDDVFAELDTARRRQLVEFTASAHQLLITAAVA
EDIPDGLGGRTLDIDIVTDDAGRSSRLITGDDRCDGQQQRDG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgtccgtcatctgtcgatgcgggatttccgctcctggcggtccctcgaggtcgat
ctcgcggcggagaccacaatctttgtgggccgcaacggtttcggaaagaccaatattctc
gaggcgctgtactacctgaccaatttgcggtcacaccgggtcagcaccgatgccccgctg
gttcatcacggggcggaggctgcggtcatcgccgcgaccgtcgaacacaacggccgcgag
ctcaccgccgaactcacggtcaacgcctccggagccaacaaggcccggatcaatcagtcg
ccggcgcgtcggcctcgggagctgatcgggattctgcggtcggtgatgttcgcccccgag
gatctgctgctcgtgcgcggcgacccgtccgatcgcaggcgctttgtcgatgagattgtc
gcacaacagggtccgcttcaggtggcggcccgcgccgactacgacaaggtattgcgtcag
cggaccgcgctgctcaagacggccggtgcggcgatgcgtcgcggcggcagtgaggccgca
tcggtgatctccacgctcgacgtctgggacgctcagctcgccgatctcggcgcccggatc
accgccgcccggatcgatgtgttggccgcgctgcgcccgcacgtggtggccgcgtacacc
gccatcgcaccgcattcacggcccgccgacctgcggtatcgtccggccgcgggccctcat
ctgctgcccggacccggcagtccggccgtggttgccgacatccgcgagcacctgctggcg
ggcctggccgaactgcgcggcaaggagatcgaacgcggcgtgtgcctggtcggtccgcac
cgcgacgatatcgacgtcatcctcggtgagcaggtggccaagggttttgccagccacggc
gaatcctggtctctggcactgtctttgcgcctgggatcggttgagttactgcgtgccgac
ggaatagaaccggtcatcatgctcgacgacgtgttcgccgaactcgataccgcccggcgc
cggcagctcgtggagttcaccgcgtcggcgcaccaactgctcatcaccgccgccgtcgcc
gaagacatccccgacggtctcggcggacgtactctggatatcgacatcgtcaccgacgac
gccggtcgcagttcgcgcctcatcaccggcgatgaccggtgtgacgggcagcaacaacgt
gacgggtag
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