Gordonia pseudamarae: GII33_00025
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Entry
GII33_00025 CDS
T07482
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
gpd
Gordonia pseudamarae
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gpd03032
]
GII33_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
gpd03400
]
GII33_00025 (gyrB)
Enzymes [BR:
gpd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GII33_00025 (gyrB)
DNA replication proteins [BR:
gpd03032
]
Prokaryotic type
DNA Topoisomerases
GII33_00025 (gyrB)
DNA repair and recombination proteins [BR:
gpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GII33_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
QHN28357
LinkDB
All DBs
Position
5728..7809
Genome browser
AA seq
693 aa
AA seq
DB search
MAETNDASSNNRKPSKKPGDYGADSINILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVD
NSVDEAMAGYASRVDVSLLADGGVEVVDDGRGIPVAIHATGVPTVEVVMTQLHAGGKFDS
DSYAVSGGLHGVGISVVNALSTKVELEIKRDGHNWSQTYLNAEPQTLHQGAATRKTGTTT
RFWPDPQIFTETTRFNAETVARRLQEMAFLNKGLTITLTDNRPQAVEVPGDPNGDGPAPG
GTEIAEAVQSETEKAAAVTKPKTRTYHYAEGLVDYIKHINKRSKAPIHQSVIGFAGKGTG
HEVEIAMQWNDGYSESIHTFANTINTHEGGSHEEGFRAALTSTVNKYAADKKLMKEKDGK
LTGDDIREGLAAVISVKVSDPQFEGQTKTKLGNTEVKGFVQKVCNEHLAHWFEANPAEAK
VIIKKAVDSAQARAAARKARDLVRRKTATDIGGLPGKLADCRSNDPALCEVYIVEGDSAG
GSAKSGRDSMYQAILPIRGKIINVEKARIDRVLKNAEVQSIITAFGTGIHDEFDIAKLRY
HKIVLMADADVDGQHISTLLLTLLFRFMRPLIEHGHVYLAQPPLYKLKWQGKNAEPEFAY
SDRERDGLLEAGKASGKKINSDDGIQRYKGLGEMNAKELWETTMDPAVRVLRQVTLDDAA
AADELFSILMGEDVAARRSFIARNAKDVRFLDV
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtggccgagaccaacgacgcatccagtaacaaccgcaagccgagcaagaagccgggcgac
tacggtgcggactccatcaacattctcgagggtctcgaggctgttcgtaaacgacccggc
atgtacatcggctccaccggtgaacgcggcctgcaccacctgatctgggaggtcgtcgac
aactccgtcgatgaggcgatggccggttatgcctcccgcgtcgatgtcagtcttctcgcc
gacgggggtgtggaggtcgtcgacgacggccgcggcatccctgtcgccatccacgccacc
ggcgtacccaccgtcgaggtggtcatgacccagttgcatgccggcggcaagttcgactcc
gattcgtatgccgtgtccggcggtctgcacggcgtcggcatctccgtggtcaacgcgctg
tccacgaaggtggagctggagatcaagcgcgacggccacaactggagtcagacgtacctg
aacgccgaaccgcagaccctgcatcagggtgcggccacccgcaagaccggcaccaccacc
cggttctggccggacccgcagatattcaccgagaccacccggttcaacgccgagacggtg
gcacggcgcctgcaggagatggccttcctcaacaagggcctgaccatcaccctcaccgac
aatcgtccgcaggcggtggaggtacccggtgatcccaacggtgacggtccggctcccggc
ggaaccgagatcgccgaggccgtgcagtccgagaccgagaaggccgcggcggtcaccaag
ccgaagacccgcacctaccactacgccgagggtctggtcgactacatcaagcacatcaac
aagcggtccaaggcgccgatccaccagtcggtgatcggcttcgccggaaagggcaccggt
cacgaggtcgagatcgcgatgcagtggaacgacggctattccgagtcgatccacaccttc
gccaacacgatcaacacgcatgagggcggcagccacgaggagggcttccgcgcggcgctc
acctcgacggtcaacaagtacgccgccgacaagaagctgatgaaggagaaggacggcaaa
ctcaccggcgacgatatccgcgaaggtctcgcggcggtcatctcggtgaaggtctccgat
ccgcagttcgagggccagaccaagaccaagctcggcaacaccgaggtcaagggctttgtg
cagaaggtgtgcaacgagcatctggcgcactggttcgaggccaatccggccgaggccaag
gtgatcatcaagaaagccgtcgattcggcgcaggcccgtgccgctgcgcgtaaggcgcga
gatctcgtgcgccgcaagaccgcaaccgatatcggcgggttgcccggcaaactggccgac
tgccgcagtaacgatcccgcgctgtgcgaggtgtacatcgtcgagggtgactccgccggc
ggcagcgccaagtcgggccgtgactcgatgtaccaggcgatcctgccgatccgtggcaag
atcatcaacgtcgagaaagcccgtatcgatcgcgtgctcaagaacgccgaggtgcagtcg
atcatcaccgcattcggcaccggcattcatgacgagttcgatatcgccaagctgcgctat
cacaagatcgtgctgatggccgatgccgacgtcgacggccagcacatctcgaccctgttg
ctcaccttgctgttccgtttcatgcgtccgctcatcgagcacggtcacgtgtatctggcg
cagccgccgctgtacaagctcaagtggcagggcaaaaacgccgaaccggagttcgcctac
tccgaccgcgagcgcgacggtctgctcgaggcgggcaaggcctcgggcaagaagatcaac
tccgacgacggtatccagcgctacaagggtctgggcgagatgaacgccaaggaactgtgg
gagaccaccatggatccggcggtccgggtgctgcgccaggtgaccctcgacgatgccgcg
gcagccgacgagctgttctccatcctgatgggtgaggacgtcgccgcccgccgcagcttc
atcgcccgcaacgcgaaggacgttcgtttcctggacgtgtga
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