Gordonia pseudamarae: GII33_00765
Help
Entry
GII33_00765 CDS
T07482
Name
(GenBank) Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
gpd
Gordonia pseudamarae
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gpd03000
]
GII33_00765
Transcription factors [BR:
gpd03000
]
Prokaryotic type
Helix-turn-helix
Other families
GII33_00765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
AAA_lid_14
GAF
HTH_50
HTH_28
HTH_30
HTH_29
nSTAND3
AAA_29
AAA_16
Sigma54_activat
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QHN24726
LinkDB
All DBs
Position
complement(177688..179520)
Genome browser
AA seq
610 aa
AA seq
DB search
MSDTYGQQLRVAAARADFLEYGPEGAAGVDDMVVASWRRSLSAGVDVDHHRATYHADIDF
DSRLARCARPVIERLTDDMTDIPVTIALTDSAARIIDRRDGSPAVGRILDRVEFARGYSY
AEGGVGTNGVGTVFEVGAPVTVIGSEHFTQSLVQFACTGAPVIDPLTRRVAGVLDVSTLA
ESWNPLVTALVRSAAADISRNLLYDRSQAKRAVFESFLRADNRFRHAVVAVGKSGPTPGA
GGTVMLNDRARALLGDDAQQKVTQFAEYLAEKCDSSAHSMPLADGRRIRLRAHPVTCGPD
IVGVVAVFDDERSALPASPDSPRTSQRPRTPDRPAGDERGPVAERTPGTSAGNAGWAAAA
EEFTRAVHAHEGVLILGESGSGRTTLAADTFRGVYELGEVIVLDAVHLDDVGAPGTPESA
GLLVLRHVDKVGPDALGTLTSVIDRARGAGYQVAVTAEPVREGPAVHAALLGHLNRTVLV
PPLRLRGDELPGLAGNLLKQLSPQGKSRIGPDALEVIRGYAWPGNIPRLRQALIHALRSR
PVGEIQAGDLPGFCRTTSTRRLTTLEIGERDSIIAALAEHDGNRVRAAAALGISRSSLYR
KIGAYGLSGV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacacctatgggcaacaactgcgggtggccgcggcccgggccgacttcctcgag
tacggaccggagggcgcggccggcgtcgacgatatggttgtggcatcgtggcggcgcagc
ctgtccgccggggtcgacgtcgatcatcaccgcgccacctatcacgccgacatcgacttc
gactcccgactggcacgctgcgcacggccggtgatcgaacggctcaccgacgacatgacc
gacatcccggtcactatcgcgctgaccgattcggcggcccgcatcatcgaccggcgcgac
ggttcgcccgcggtcggcaggatcctggaccgggtggagttcgcacgcggatactcctac
gccgagggcggggtcggcaccaacggggtgggtaccgtgttcgaggtcggtgcaccggtc
acggtcatcggttccgagcacttcacccagtcactggtccagttcgcctgcacgggggcg
cctgtcatcgacccgctgacccggcgggtggccggtgtcctggatgtgagcaccctggcc
gagagctggaatccactggtcaccgcgctggtacggtcggccgccgccgacatctcccgc
aacctgctgtacgaccggagccaggccaaacgtgctgtgttcgaatcatttctgcgcgcc
gacaacagattccgccacgcggtggtggccgtcgggaagtccggccccaccccgggtgcg
ggcgggacggtgatgctcaacgaccgggcccgggcgctgctcggcgacgacgcccagcag
aaggtgacccagttcgccgagtatctcgccgaaaaatgcgacagctcagcgcattcgatg
cctctggcggacggccgcaggatccggctgcgcgcccaccccgtcacctgcgggcccgat
atcgtcggggtggtggctgtgttcgacgacgagcgttccgcactgcccgcatccccggac
agcccgcggacctcgcagcggccacggacccccgaccgcccggccggcgatgagcgcggg
ccggtcgcggagcggaccccgggcacttcggcgggcaatgccggttgggcggccgccgca
gaggagttcacccgtgccgtccacgcgcatgagggcgtgttgattctgggcgaatcaggt
tcgggaagaacaacactggctgccgacacgttccggggtgtgtatgagctcggggaggtg
atcgtgcttgacgcggtgcatctcgacgacgtcggggcacccgggacgcctgagagcgcg
ggcctgctggtgctccgccacgtcgacaaggtcggaccggacgccctcggcaccctcacc
tccgtcatcgaccgcgcccgcggggccggctaccaggtggcggtcaccgccgaacccgtg
cgcgagggtccggccgttcacgcggcactgctgggacacctgaaccgcaccgtgctggtg
ccgccgttgcggctgcgcggcgacgagttgcccggactggccgggaatcttctgaaacag
ctttccccgcagggtaaaagccggatcggaccggacgcgctggaggtcatccgggggtac
gcgtggccgggcaacatcccccggctacgccaggcactgatccacgcgctgcgcagccgc
ccggtcggcgagatccaggccggcgacctgccgggattctgccggaccacctccacccgc
agactcaccacgctcgagatcggtgaacgcgacagcatcatcgccgcgctcgccgaacac
gacggcaatcgggtgcgggccgcggcggcgctcggaatctcccgcagctcgctgtaccgc
aagatcggcgcatacgggctgtccggggtatag
DBGET
integrated database retrieval system
