Gordonia pseudamarae: GII33_07915
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Entry
GII33_07915 CDS
T07482
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gpd
Gordonia pseudamarae
Pathway
gpd00300
Lysine biosynthesis
gpd00470
D-Amino acid metabolism
gpd01100
Metabolic pathways
gpd01110
Biosynthesis of secondary metabolites
gpd01120
Microbial metabolism in diverse environments
gpd01230
Biosynthesis of amino acids
Module
gpd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GII33_07915 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GII33_07915 (lysA)
Enzymes [BR:
gpd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GII33_07915 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QHN25896
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All DBs
Position
1796257..1797678
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AA seq
473 aa
AA seq
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MSAHPAGPRHADIPAAPHLAQRPHDPAELAEIPANVWPRNAIRADSGELTLAGVPVGELA
REYGTPLFVVDEKDFRSRCADMIGAFGQYGRVHYASKAFLSTEIARWVNEEGLSLDVCSG
GELAIALHAGFPAERIALHGNNKSTAELGAALDAGVGHIVLDSLAEIDRLDTLAGDRGIV
ADVLVRVTVGVEAHTHEFIATAHEDQKFGFALSGGVAMDAVRRVFATDNLRLVGLHSHIG
SQIFDMDGFELAAHRVLGLLKEIVSEFGVDKTAQLEIIDLGGGLGISYLQDDDPLPVKDV
ADTLAAIVRRESAAVGLPMPTLAVEPGRAIAGPGTVTVYEVGTIKDVELERRAVRRYVSV
DGGMSDNIRTVLYQAEYDVRLVSRVSTAPAVVSRVVGKHCESGDIIIKDCWLPGDLRPGD
LLAVAATGAYCYSMSSRYNMVMRPPVVAVADGASRLLIRRETIEDFLRLEVSK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgcatccggccggcccgcggcatgcggacatcccggcggcaccgcacctggcc
cagcgaccgcacgaccccgcggaactcgccgagattccggccaacgtgtggccgcgcaac
gcgatccgcgccgactccggcgagctgacactcgcgggtgtgccggtgggtgaactggcg
cgcgagtacggtacgccgctgttcgtggtggacgagaaggactttcgttcgcgctgcgcg
gacatgatcggtgcgttcggtcagtacggtcgggttcactacgcgtccaaggcatttctg
agcaccgagatcgcccgctgggtgaatgaggaggggctgagcctggacgtctgctccggc
ggagaattggccatcgccctgcacgcgggcttccccgccgaacgaatcgccttgcacggc
aacaataaaagcaccgccgaactcggcgccgcgctcgatgccggcgtcgggcacatcgtg
ctcgactcgttggccgagatcgaccggctcgacacgctcgccggtgaccgcggcatcgtc
gccgacgtgctggtgcgggtcaccgtgggcgtggaggcgcatacccacgagttcatcgcg
accgcgcacgaggaccagaagttcgggttcgccctgtccggcggtgtcgcgatggatgcg
gtgcgccgcgtgttcgccaccgacaacctgcgcctggtcggtctgcacagccatatcggt
tcgcagatcttcgacatggacggcttcgaactggccgcacatcgggtgctcgggctgctc
aaggagatcgtctccgagttcggagtcgacaagacagcgcagctggagatcatcgatctc
ggtgggggactggggatctcgtatctccaggatgacgacccgctgccggtgaaggatgtc
gcggacacgctggcggcgatcgtccggcgcgaatcggccgccgtcggtctgccgatgccc
accctcgccgtcgaaccggggcgtgcgatcgccggtcccggcacggtcaccgtgtacgag
gtgggcaccatcaaggatgtcgaactcgaacgccgcgccgtccgtcgctacgtctccgtc
gacggcgggatgagcgacaatatccgcaccgttctgtatcaggccgagtacgacgtacga
ttggtctcgcgtgtgtcgacggcacccgcggtggtcagccgggtggtgggcaaacactgc
gagagcggtgacatcatcatcaaggactgctggttgcccggcgatctgcggcccggcgat
ctgctggccgtggcggcgacgggtgcgtactgctattcgatgtcgagccggtacaacatg
gtgatgcgcccgccggtggtggccgtcgccgacggcgcgtcgagactgctgatccgtcgg
gagacgatcgaagacttcttgcgactggaggtgtccaagtga
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