Gordonia pseudamarae: GII33_08300
Help
Entry
GII33_08300 CDS
T07482
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
gpd
Gordonia pseudamarae
Pathway
gpd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GII33_08300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gpd03000
]
GII33_08300
03400 DNA repair and recombination proteins [BR:
gpd03400
]
GII33_08300
Enzymes [BR:
gpd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
GII33_08300
Transcription factors [BR:
gpd03000
]
Prokaryotic type
Helix-turn-helix
AraC family
GII33_08300
DNA repair and recombination proteins [BR:
gpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GII33_08300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QHN25961
LinkDB
All DBs
Position
1890153..1891610
Genome browser
AA seq
485 aa
AA seq
DB search
MSPASMTFDERYGAVTARDGRFDGQFILAVRTTGIYCRPSCPARTPKPSNVEFFPTSAAA
HEAGYRACRRCLPEAAPGSPEWDLRHDTVGRAMRLIADGVVERDGVGALAARLGYSVRHL
NRMLTTELGAGPLALARAQRAHTARILLTGTDLAVSDIAFAAGFGSIRQCNDTIREIFAM
TPTQLRSRSRSAATTPGAVDLVLPVRRPFDAHGIFRWMADRCIPGMEEASAAGFARTLRM
AGGTARFEVREDSAGRLRLRVHICDLADLGPLVTRVRRIFDLDADPVAVDRALGAHPELA
SLVAATPGVRVPGAADAHEMLIRAMVGQQITVVAARIALTRLVRELGETVDATDGGPHLL
FPTMAAVAEHGHEVLRGPVARVRAITGVAAALAGGTLTLTSADDGAEQRAELLARAGIGP
WTADYVRMRVLGDPDVLLPGDSAVRAGAGAVGLPSGPRELTRWSVRVAPWRSYLTAHLWR
ANTPP
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagcccggcatcgatgaccttcgacgagcgttacggtgcggtcaccgctcgtgacggc
cggttcgacgggcagttcatcctcgcagtccgcaccaccggcatctactgccggccctcg
tgcccggcacgcacaccgaaaccgtcgaatgtggagttcttccccacgagtgcggccgcg
cacgaggccggttaccgcgcctgtaggcgatgtctgcccgaggccgcaccgggttcgccg
gaatgggatctgcgccacgacacggtagggcgggcgatgcggctgatcgccgacggcgtc
gtcgaacgtgacggggtgggcgccctcgccgcccggctgggatattcggtgcggcacctg
aaccggatgctcaccaccgaactgggcgccggaccactggcactggcccgcgcgcagcga
gctcacaccgcacgaatcctgttgaccggcaccgatctggcggtatcggatatcgcgttc
gcggcagggttcggcagcatccggcaatgcaatgacaccatccgggagatcttcgcgatg
acaccgacgcagttgcggtcccgaagtcgctcggcggccacgactcccggggcggtcgat
ctggttctgccggttcgtcggcccttcgatgcccacgggatcttccggtggatggccgac
cggtgcatcccgggcatggaggaggcgagtgcggcgggcttcgcccgtaccctccggatg
gccggcggcacggcgcggttcgaggtgcgcgaggactcggcgggccgactgcgcctgcgg
gtccacatctgcgatctggccgatctcgggccgctcgtcacccgggtacgcaggatattc
gacctcgacgcggacccggtggccgtggaccgcgcgctcggcgcgcaccccgagctcgca
tcgctcgtggccgccaccccgggggttcgggtacccggggccgccgatgcgcacgagatg
ctgatcagggcgatggtcgggcagcagatcaccgtggtggccgcccgcatcgcgctgacc
cggctcgtgcgggaactcggcgagaccgtcgacgcgaccgacggtggcccacatctgctg
tttccgacgatggcggcggtcgccgaacacggccatgaggtactgcgcggaccggtcgcc
cgggtgcgggcgatcaccggggtggccgccgccctcgccggcggcaccctgaccctgacc
tccgccgacgacggcgccgagcagcgcgccgaattgctcgccagagccgggatagggccg
tggaccgccgactacgtccggatgcgggtcctcggcgatcccgacgtcctgctgcccggt
gacagtgcggtccgcgcgggggcgggggccgtgggcttgccgtccggtccgcgagaactg
acccggtggtcggtgcgtgtcgcaccgtggcgcagttacctcaccgcacacctgtggcgg
gcgaacacaccgccgtga
DBGET
integrated database retrieval system
