Gordonia pseudamarae: GII33_08980
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Entry
GII33_08980 CDS
T07482
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gpd
Gordonia pseudamarae
Pathway
gpd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GII33_08980 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpd03400
]
GII33_08980 (mutM)
Enzymes [BR:
gpd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GII33_08980 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GII33_08980 (mutM)
DNA repair and recombination proteins [BR:
gpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GII33_08980 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
DUF2857
Zn_ribbon_ACC
Zn_ribbon_3
Zn_Ribbon_TF
TackOD1
Motif
Other DBs
NCBI-ProteinID:
QHN26077
LinkDB
All DBs
Position
2048739..2049650
Genome browser
AA seq
303 aa
AA seq
DB search
MPELPEVETIRLGLAAHIVGRHIDQVEVLHPRAVRRQAGGAADLVARLRGLTIAEVRRRG
KYLWLAVDSGEPADGWAVVIHLGMSGQLLIAEPGAPDQTHLRIRLTLAPDHATAAPIELR
FVDQRTFGGWFIDDWAIDDWAVDDSGTIVPESISHIAPDPFESSYDQERVIARIRAKHTE
IKRALLDQTLISGVGNIYADEALWRARLHGTRVTDRISRAKLTELLDAVTDVMSEAIVVG
GTSFDDLYVNVNGQSGYFDRNLHSYGRHGRPCPRCGTLIVREQFMNRGSHFCPKCQPRPR
RRR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaactgcccgaagtcgagaccatccggctcggcctcgcggcgcatatcgtcggt
cgccatatcgaccaggtcgaggtcctgcatccgcgtgcggtgcgcaggcaggccggggga
gccgccgatctggttgcccggcttcgtggtctgaccatcgccgaggtccggcgtcgcgga
aagtatctgtggctggccgtcgactccggcgagcccgccgacggctgggcagtggtgatt
catctgggaatgagtgggcaactcctgatcgccgaacccggcgcacccgaccagacacac
ctgcggatccggctgaccctcgcaccggatcacgccaccgccgcaccgatcgaactacga
ttcgtcgaccaacgcaccttcggtggctggtttatcgatgactgggctattgacgactgg
gctgttgatgactcgggaactattgtgcccgaatcaatttcgcatatcgctcccgatccg
ttcgaatcctcgtacgaccaggagcgggtgatcgccaggatccgggccaaacataccgag
atcaagcgcgccctgctcgatcagacgctgatctccggagtcggcaacatctacgccgac
gaggccctgtggcgggcgcgcctgcacggcacccgcgtcaccgaccgcatcagccgcgcc
aaactcaccgaactgctcgacgccgtcaccgatgtgatgagtgaggcgatcgtcgtcggc
ggcacctcgttcgacgacctgtacgtcaacgtcaacggccagtccgggtacttcgacagg
aatctacattcatatggcagacatggccgaccatgtccgaggtgcggaacgctcatcgtg
agggagcagttcatgaaccggggctctcacttctgtccgaagtgtcagccgcggccacgg
aggagacgctga
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