Gordonia pseudamarae: GII33_09800
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Entry
GII33_09800 CDS
T07482
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
gpd
Gordonia pseudamarae
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gpd03016
]
GII33_09800 (miaB)
Enzymes [BR:
gpd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
GII33_09800 (miaB)
Transfer RNA biogenesis [BR:
gpd03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
GII33_09800 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
Phage-tail_3
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QHN28596
LinkDB
All DBs
Position
2223553..2225085
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AA seq
510 aa
AA seq
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MGQPAPGSAGLLSYQVRTYGCQMNVHDSERISGLLEGAGYVRAEDGDEADLVVFNTCAIR
ENADNKLYGNLSHLAPVKSRKPGMQIAVGGCLAQKDKDTVLRKAPWVDVVFGTHNIGSLP
ALLDRARHNEAAQVEILDSLERFPSTLPAKRDSAYSGWVSVSVGCNNTCTFCIVPSLRGK
EVDRRPGDVLAEVQALVDQGVLEVTLLGQNVNAYGMSFADPEQPRNRGAFAELLRACGDI
DGLERVRFTSPHPAEFTDDVIEAMAETPNVCPQLHMPLQSGSDRILKAMRRSYRQRKFLG
ILDKVRAAMPHAAITTDIIVGFPGETEEDFQATLDVVEQARFSSAFTFQYSPRPGTPAAT
MADQVPPEVVSERYRRLIALQERICLDENQRLVGTAAELLVVADEGRKSAATQRKTGRAR
DGRLVHFAAGEHAAAIRPGDVVTTTITGAAPHHLIADGGVIGHRTTRAGDAHEKAITPVT
APIGVGLGMPSIGPKAAEPAAVGCSSGCGS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atcgggcaacccgcgcccggttcggcggggttgttgagttatcaggtccgtacctacggc
tgccagatgaatgtgcacgattccgagaggatctccgggctcctggagggagccggctac
gttcgcgccgaagacggcgacgaggccgatctcgtcgtcttcaacacctgtgccatccgt
gagaacgccgacaacaaactgtacggcaacctgtcgcatctggcgccggtgaaatcgcgc
aaacccggtatgcagatcgctgtcggcggttgcctggcccagaaggacaaggacacggtg
ctccggaaggcgccgtgggttgacgtcgtcttcggcacccacaacatcgggtcgctgccc
gcactgctcgatcgcgcccgccacaatgaggcggcgcaggtggagatcctcgactcgctc
gagcgattcccgtcgacgctgccggccaaacgtgactcggcctactccgggtgggtgtcg
gtgtcggtgggctgcaacaacacctgcacgttctgcatcgtgccgtcgctgcgcggcaaa
gaggtcgaccggcgcccgggtgatgtcctggccgaggtgcaggcgctcgtcgatcagggt
gtgttggaggtgacgttgctcgggcagaacgtgaacgcctacggcatgtccttcgccgat
cccgaacagccgcgcaaccggggcgcgttcgccgagttgttgcgggcgtgcggcgacatc
gacggcctggagcgggtccggttcacctcgccgcatccggccgagttcaccgatgatgtg
atcgaggcgatggccgagacccccaacgtgtgcccgcaactgcacatgccgttgcagtcc
gggtccgaccggatcctcaaggcgatgcggcgcagttaccgtcagcgcaagttcctcggc
atcctcgacaaggtgcgtgcggcgatgccgcacgcggccatcaccaccgacatcatcgtc
gggttccccggcgagaccgaggaagacttccaggccaccctcgatgtggtggagcaggcc
cgcttctccagcgcgttcaccttccagtattcgccgcgaccgggaaccccggcggcgacg
atggccgaccaggtaccgcccgaggtggtgtccgagcgctaccggcgcctgatcgccctg
caggaacgcatctgcctggacgagaaccagcgacttgtcgggaccgccgccgaactgctc
gtggtagccgatgagggtcgtaaatccgctgccacacagcgtaaaacgggtcgtgccagg
gatggtcgcctggtgcacttcgcggccggcgagcatgcggcggcgatccgtccgggcgat
gtggtcaccaccacgatcaccggtgccgcaccgcaccatctgatcgccgacggcggggtc
atcggtcaccggaccacccgcgcgggcgacgcgcacgagaaagccatcacccccgtcacc
gcgcccatcggtgtgggtctggggatgccgtcgatcggcccgaaggccgccgaaccggcc
gccgtcggttgctcgagcggctgcgggtcctaa
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