Gordonia pseudamarae: GII33_09840
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Entry
GII33_09840 CDS
T07482
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
gpd
Gordonia pseudamarae
Pathway
gpd00300
Lysine biosynthesis
gpd00470
D-Amino acid metabolism
gpd01100
Metabolic pathways
gpd01110
Biosynthesis of secondary metabolites
gpd01120
Microbial metabolism in diverse environments
gpd01230
Biosynthesis of amino acids
Module
gpd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GII33_09840
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GII33_09840
Enzymes [BR:
gpd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
GII33_09840
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Herpes_ORF30
Motif
Other DBs
NCBI-ProteinID:
QHN26222
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Position
2233943..2234863
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AA seq
306 aa
AA seq
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MSDATDALRFVKGHGTQNDFVVLADPAAELGLDAARVAAICDRQRGIGADGLLRVSRAVA
LVERGVLDALPAGVRPDDWFMDYRNADGSIAEMCGNGVRVFAHYVRATGLVDTDTFTVGS
RAGARPVIIHSHDQVRADVTVTMGQARVDGRSQATVGDTTYHGAVIDVGNPHLACVVPDL
TAEQLAGIDFSAGVGLDAGVFPHGANLELVTPARPGGDGPDGTTVDFSAHMRVFERGVGE
TRSCGTGLVAAGKASLGALGRDTGSLHITVPGGSVLVTVDPDGATLRGPSVLVAEGRFRP
GWSDEG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatgctaccgacgcgctgcgttttgtgaagggccacggcacccagaacgacttc
gtggtcctcgcggacccggccgccgaactcggactcgacgcggcgcgggtcgccgcgatc
tgcgaccggcaacgcgggatcggggccgacggactgctgcgggtgtcccgcgctgtcgcc
ctcgtggagcgcggcgtactcgacgcactgcccgccggtgtccggcccgacgactggttc
atggactaccgcaacgccgacggctcgatcgccgagatgtgcggcaacggggtgcgcgtg
ttcgcgcactacgtgcgcgccaccggcctggtcgacaccgacacgttcaccgtcgggtcg
cgggccggtgcgcgtccggtgatcatccattcccacgatcaggtgcgggccgacgtcacc
gtcacgatggggcaggcccgggtcgacggccgatcgcaggccaccgtgggggacacgacc
tatcacggcgcggtcatcgatgtcggcaacccgcacctggcttgtgtggtgcccgatctg
acggccgaacagctggccgggatcgatttctcggccggggtcggtctcgacgccggtgtg
tttccccacggcgccaacctcgaactcgtcacgcccgcccgcccgggcggcgacggcccc
gacggaacgacagtcgacttctcggcgcacatgcgggtcttcgaacgcggtgtcggggag
acccgcagctgcgggaccgggctcgtcgcggccggtaaagcatcgctcggtgcgctcggc
agggacaccggatcgttgcacatcaccgtgcccggcgggtctgtgctggtcaccgtcgac
cccgacggcgcgacgctgcgtggcccgtcggtgctggtggccgagggccggttccgtccg
ggctggtcggacgagggctga
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