Gordonia pseudamarae: GII33_10065
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Entry
GII33_10065 CDS
T07482
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
gpd
Gordonia pseudamarae
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gpd03016
]
GII33_10065
Enzymes [BR:
gpd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GII33_10065
Transfer RNA biogenesis [BR:
gpd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GII33_10065
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QHN26261
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All DBs
Position
complement(2286696..2287940)
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AA seq
414 aa
AA seq
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MTDTPTPLTEPAGGVPPVLTSADEFADTARRLAGGTGPIAVDTERASGYRYSQRAYLIQL
KRTGAGSFLLDPTLDPEALTPVIDVLTGPEWVLHAADQDLPCLREVGFVCSELFDTELAG
RLLGRPKVNLATMVEEFLGLGLSKGHGAADWSRRPLPHDWLVYAALDVEVLVELREATAA
ALTEAGKGEWAHEEFAAILNRPTPPARVDRWRRTTGIHTVKSARALAAVRELWLAREEVA
RRRDIAPGRILPDSAIVTAATADPATIRDLTRLPVFGGPRQSRNARTWFDALERARALPT
AELPPRKPPSTGLPAYNRWDRSNPEGAERAAVIRPLLGALAEENELPPENLLAPDVVRTL
CWEGVDLPATPESVDARLADAGARSWQRYVVSGAIAEALNTAGDAPDSAPTADA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacacgcccacgccactcaccgagccggccggcggtgtgccgccggtgctgaca
tcggcggacgagttcgccgacaccgcgcgacgtctggccggcggtaccggccccatcgcc
gtcgacaccgaacgcgcgtcgggctatcggtactcccagcgcgcctacctgatccagctc
aaacgtacgggtgcgggatccttcctgctcgatcccaccctggacccggaagcactgacc
ccggtcatcgacgtgctgaccggccccgaatgggtgttgcacgccgccgaccaggatctg
ccgtgcctgcgtgaggtcggtttcgtgtgctcggagctgttcgacacagaactggccggc
cggctgttgggacgtccgaaggtgaacctggccaccatggtcgaggagtttctgggactc
gggctgagcaagggccacggcgcggcggactggtcgcggcggccactgcctcacgattgg
ctggtgtacgcggcgctggacgtggaggtgctggtcgagttgcgcgaggccaccgccgca
gccctgaccgaggccggcaagggtgagtgggcgcatgaggagttcgccgcgatactcaac
cggcccacgccaccggcccgcgtcgaccggtggcgccggaccaccgggatccacaccgtc
aagagcgcccgcgcgctcgccgcggtacgtgaactgtggctggcgcgcgaggaggtcgcc
cgccgccgtgacatcgccccggggcgcatcctgcccgattcggcgatcgtcaccgccgcc
accgccgacccggccaccatccgcgatctgacgcggctaccggtgttcggcggtccgcgg
caaagccgcaacgcccgaacctggttcgacgcgctcgaacgggccagagcgctgccaacc
gccgaacttcccccccgcaaaccaccgtcgaccggcctgcccgcctacaaccgatgggat
cgcagcaacccggagggcgccgaacgggccgccgtgatccggccgctgctcggtgcgctc
gccgaggagaacgagcttccacccgagaatctgctcgctccggacgtcgtgcgcaccctg
tgttgggagggcgtggacctgccggccacccccgagtccgtcgacgcccgtctcgctgat
gccggggcccggtcgtggcagcggtatgtggtgtccggcgcgatcgccgaagcgctgaac
acagccggtgacgcgccggacagcgcaccgacagccgatgcctga
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