Gordonia pseudamarae: GII33_12555
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Entry
GII33_12555 CDS
T07482
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
gpd
Gordonia pseudamarae
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gpd03009
]
GII33_12555
Enzymes [BR:
gpd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
GII33_12555
Ribosome biogenesis [BR:
gpd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GII33_12555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
QHN26666
LinkDB
All DBs
Position
complement(2855452..2856495)
Genome browser
AA seq
347 aa
AA seq
DB search
MASASRDGTPGPRKRAGRSTSSSTGGQPARGSRKTGQGKSGKAGSGFPKGAKGAADAGRS
TKKTHRKGTSKPDVASGKVRLNNARLARHQIAEGGGDGGASYVSDGVRLQKVLAQAGVAS
RRGAEELIAAGRVSVDGEIVIEQGLRIDPNTAVVRVDGSRVILDEDKLYLALNKPRGMQS
TMADDQGRPCIGDIVAERVMAGQRMFHVGRLDADTEGLLLLTNDGELAHRLMHPSYEVPK
TYMATVKGEVPRTLARTLRAGVELDDGPVKVDSFTIVDVNNGASLVEIVLHEGRNRIVRR
LMEEVGFPVRRLLRTHVGEVALGDQRPGSLRVLGRDEIGGLYKAVGL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgctagccgagacggcacaccgggcccgcgtaaacgcgctggtcgttccaca
tcttcatccaccgggggacagcccgcgcgggggtcgcgcaagacggggcaaggcaagtcg
ggcaaggccggttccgggttccccaagggtgccaagggcgccgcagacgccggtcggtcc
accaagaaaacccaccgcaagggcacatcgaagcccgatgtcgcatcgggcaaggtgcgt
ttgaacaatgcccgactggcccggcaccagatcgccgaaggcgggggtgacggcggcgcg
tcgtatgtctccgacggggtgcggctccagaaggtgctcgcacaggccggtgtcgcctcg
cggcgcggcgccgaggaactgatcgcggccggccgggtcagcgtcgacggtgagatcgtg
atcgagcagggcctgcggatcgacccgaacaccgcggtggtgcgtgtcgacggctcgcgc
gtcatcctcgacgaggacaagctgtatctggcgctgaacaagccgcgcggcatgcagtcg
acgatggccgacgatcagggccgcccgtgtatcggtgacatcgtcgctgaacgggtgatg
gccggtcagcgcatgttccacgtgggtcgcctcgacgccgacaccgagggtctgctgttg
ctgaccaacgacggcgagctggcgcaccgcctcatgcacccgtcgtacgaggtgcccaag
acctacatggcgacggtgaagggcgaggtgccgcgcactctggcccgtacgctgcgcgcc
ggtgtcgaactcgacgacggtccggtgaaggtggactcgttcaccatcgtcgacgtcaac
aacggtgcgtcgctggtggagatcgtgctgcatgagggccgcaaccgcatcgtccggcgc
ctcatggaggaggtcgggttcccggtgcgccgactgctgcgcacccacgtcggcgaggtc
gcgctcggcgatcagcgtcccggcagcctgcgggtgctcggccgcgatgagatcggcggt
ctgtacaaggcggtcggcctgtga
DBGET
integrated database retrieval system
