Gordonia pseudamarae: GII33_12610
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Entry
GII33_12610 CDS
T07482
Name
(GenBank) TlyA family rRNA (cytidine-2'-O)-methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
gpd
Gordonia pseudamarae
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gpd03009
]
GII33_12610
Enzymes [BR:
gpd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
GII33_12610
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
GII33_12610
Ribosome biogenesis [BR:
gpd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
GII33_12610
23S rRNA modification factors
GII33_12610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
Methyltransf_23
S4_2
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
QHN26676
LinkDB
All DBs
Position
complement(2868085..2869011)
Genome browser
AA seq
308 aa
AA seq
DB search
MAARARLDAELVRRGLARSREQAREFIAAGTVKVNGVVAAKPATNVARDTPIVVVDAPSD
DWASRGAHKLIGALDAYTPDGLTVAGRRCLDAGASTGGFTDVLLRREAREVVAVDVGYGQ
LIWRLQNDERVDVHDRTNVRALTPDQIGGRVELVVADLSFISLSLVLPALADCVEPGGDL
LPMVKPQFQVGKDRVGAGGVVRDPALRIEAVAEVARDAAALGLRTRGVVASPLPGPAGNV
EYFIWLHKPDIALPESDIALPTPREATRTGDMSSSADRVGDRSASAREMRVDPEIMAMIV
AAVEAGPR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccgcgcccggctcgacgccgaactggtccgccgcgggctcgcgcgttcgcgt
gagcaggcgcgcgagttcatagcggccggaacggtcaaggtcaatggcgtggtggccgcc
aaacccgccaccaatgtcgcccgcgacaccccgatcgtcgtcgtcgacgcaccgtcggac
gactgggcctcgcgtggggcgcacaaactgatcggtgctctggatgcgtacaccccggat
ggcttgacggtcgcggggcgtcgctgtctcgacgccggagcctccacgggtggcttcacc
gacgtgctgctgcggcgcgaggcccgcgaggtcgtcgcggtcgacgtcggctacggacag
ctgatctggcgtctgcagaacgacgaacgcgtcgacgtgcacgacaggacgaacgtgcgg
gccctgacacccgaccagatcggcggccgggtcgaactggtggtggcggatctgtctttc
atctcgttgtcgctggttctgcctgcgctcgccgactgtgtcgagccgggcggcgacctg
ctgccgatggtcaagccgcagtttcaggtcgggaaggaccgcgtcggcgcgggcggtgtc
gtgcgagatcccgcgttgcgcatcgaggccgtcgccgaggtggcacgcgatgccgcggcc
ctggggttacgtacccgcggcgtggtcgccagtccgctgcccggccccgccggcaacgtg
gagtacttcatctggttgcacaagcccgacatcgcgctgcccgagtccgacatcgcgctg
cccactccaagggaggcaacccgcaccggcgacatgtcgtcgtcggccgatagggtcgga
gaccggagtgcttcggcgcgcgagatgcgggtcgatcctgagatcatggcgatgatcgtg
gccgcggtcgaggccgggcctcgctga
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integrated database retrieval system
