Gordonia pseudamarae: GII33_12900
Help
Entry
GII33_12900 CDS
T07482
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gpd
Gordonia pseudamarae
Pathway
gpd03030
DNA replication
gpd03410
Base excision repair
gpd03420
Nucleotide excision repair
gpd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GII33_12900 (polA)
03410 Base excision repair
GII33_12900 (polA)
03420 Nucleotide excision repair
GII33_12900 (polA)
03440 Homologous recombination
GII33_12900 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gpd03032
]
GII33_12900 (polA)
03400 DNA repair and recombination proteins [BR:
gpd03400
]
GII33_12900 (polA)
Enzymes [BR:
gpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GII33_12900 (polA)
DNA replication proteins [BR:
gpd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GII33_12900 (polA)
DNA repair and recombination proteins [BR:
gpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GII33_12900 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GII33_12900 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
Sec8_N
HHH_5
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
QHN26715
LinkDB
All DBs
Position
complement(2954977..2957742)
Genome browser
AA seq
921 aa
AA seq
DB search
MSPAKSAAPAQSSSARTASGKPVLMLLDGHSLAYRAFFALPAENFTTNTGQTTNAVYGFT
SMLINLLRDEQPTHVAAAFDVSRKTFRSELFPEYKAQRAKSPEEFGGQVELTKEVLGALG
IPVMAIEGYEADDIIATLATQAAERGFDVLVVTGDRDSLQLVDDSVTVLYPKRGVSELTR
FTPEEVEKKYGVTPAQYPDIAALRGDNSDNLPGVPGVGDKTAAKWIRQYGSLTALVDHVD
EIKGKVGDSLRANLASVQTNRHLTQLVRDMQLPAGPDELALVGWDRERIHTLFDELEFRV
LRDRLFNTLASAEPEAEAGFDLDGSVLGEGEVGPWLDAHARTGRTGIAVSAPRRVVDADP
SGIAIAAADGASAYIAIPAIGQADEQDLARWLVDEDAPKACHEAKWAIHALRVRGWTLRG
VTSDTALAAYLVRPGQRSFELDDLSLRYLRRELKAEGTDGDGQLTLLDADGLDADGQDET
KVFEHQMLQARAVAELADALDTELDQIDSRSLLTDMELPLTVVLADLESAGIAVDTKHFQ
ELEQQFADRVRAAADAAYEVIGEQINLGSPKQLQTVLFDKLDMPKTKKTKTGYTTDADAL
QSLFEKTEHPFLAHLLEHRDATRLRVTVEGLLKSVADDDRIHTTFNQTVAATGRLSSTDP
NLQNIPVRTEAGRQIRHGFVVGPNARGTEFETLMTADYSQIEMRIMAHLSGDEGLIEAFN
TGEDLHNFVGSRAFGVPIDEVTTEMRHRVKAMSYGLAYGLSAFGLAAQLKISRDEAKAQM
DQYFARFGGVRDYLRHVVEEARTNEYTATLFGRRRYLPDLNSDNWQRRQSAERMALNAPI
QGTAADIIKVAMINVHKRLAAEGLSSRMLLQVHDELVVEVAAGERDAVETLVREEMGSAI
TLSVPLEVSVGFGRSWDDAAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcccgccaagagtgccgcacccgcccagagttcgtccgcccgcaccgcgtcgggc
aaaccggttctgatgctgctcgacggccattcgctggcctaccgggcgtttttcgcgctg
cccgcggaaaatttcacgaccaacacagggcagaccaccaacgcggtgtacggcttcacc
tcgatgctcatcaacctgctgcgcgacgaacaacccacccacgtcgcggctgccttcgac
gtatcccgcaagaccttccgttcggaactgtttcccgaatacaaggcgcagcgggccaag
tcgccggaggagttcggcgggcaggtcgaactcaccaaagaggtgctcggtgcgctgggg
atcccggtgatggcgatcgagggctatgaggccgacgacatcatcgccacgctcgccacg
caggccgccgaacgcggtttcgacgttctcgtcgtgaccggcgaccgggattcgctgcaa
ctggtcgacgactcggtgaccgtcctctacccgaagcgaggggtgtcggagttgacccgg
ttcacccccgaagaggtggagaagaagtacggcgtcacccccgcccagtaccccgacatc
gcggcgttgcgcggcgacaacagcgacaacctgcccggcgtgcccggcgtcggtgacaag
accgccgccaaatggatccgccagtacggctcgctgacagcgctcgtcgaccacgtcgac
gagatcaagggcaaggtgggtgactcgctgcgcgccaacctcgcctcggtgcagaccaac
cggcatctcacacagctggtgcgcgacatgcaattgcccgccggccccgacgaactggcg
ctggtcgggtgggatcgtgaacgcatccacaccctgttcgacgagctggagttccgggtg
ttgcgcgaccgcctgttcaacacactcgcgtcggcggagccggaggccgaggccgggttc
gacctggacggatcggtcctgggtgagggcgaggtgggtccctggctcgacgcgcacgcc
cgcaccggacgcaccggcatcgccgtgtcggcgccgcgccgggtcgtcgacgcagacccg
tccggtatcgccatcgccgccgccgacggcgcatcggcgtatatcgcgatccccgcgatc
gggcaggccgacgaacaggacctggcgcggtggctcgtggacgaggacgcgcccaaggcc
tgtcacgaggccaagtgggcgatccacgcgctgcgggtgcgcggctggacgttgcggggg
gtcaccagcgacaccgcgctcgccgcctacctggtacgccccggtcagcgcagcttcgaa
ctcgatgacctgtcgttgcggtatctgcgccgcgaactcaaggccgagggaaccgacggt
gacggtcagctgacgttgctcgacgccgatggactcgacgccgacggacaggacgagacc
aaggtattcgagcatcagatgctgcaggcgcgggcggtggccgaactggccgacgcgctc
gacaccgagttggaccagatcgattcacggtcgctgctcaccgacatggagctgccgctc
accgttgtcctggcggatctggagtcggcgggaatcgcggtggacaccaagcatttccag
gaactcgagcagcaattcgccgatcgggtccgggccgccgcggacgcggcctacgaggtg
atcggggaacagatcaatctgggttcgcccaagcagttgcagacggtgctgttcgacaag
ctcgacatgcccaagaccaagaagaccaagaccggctacaccaccgacgccgacgccctg
cagagtttgttcgagaagaccgaacatccgttcctggcgcacctgctcgagcatcgtgac
gccacccggctgcgggtcacggtcgagggtctgctcaagtcggtggccgacgacgaccgc
attcacaccaccttcaatcagacggtcgcggccaccggacggttgtcctcgaccgacccg
aacctgcagaacatcccggtgcgcaccgaggccggtcggcagatccggcacggtttcgtg
gtcgggcccaacgcccgcggcaccgagttcgagaccctgatgacggccgactacagccag
atcgagatgcggatcatggcgcacctgtcgggcgacgagggtctgatcgaggccttcaac
acgggtgaggacctgcacaacttcgtcggttcgcgggcgttcggcgtgccgatcgacgag
gtgaccaccgagatgcggcaccgggtcaaggccatgtcgtacggactcgcgtacggcttg
agcgccttcggtctcgccgcgcagctcaagatcagcagggacgaggccaaggcccagatg
gaccagtacttcgcccggttcggcggggttcgcgactatctgcggcatgtggtcgaggag
gcccgcaccaacgagtacaccgcgacgttgttcggtcgccgacggtatctgcccgacctc
aacagcgacaactggcagcgcaggcagtcggccgaacggatggcgctcaacgcgcccatc
cagggcaccgccgccgacatcatcaaggtcgccatgatcaacgtccataaacgtcttgcc
gcagaaggtttgtcgtcgcgaatgctgttgcaggtacacgacgaactggtggtggaggtg
gctgccggggaacgcgacgccgtggagacgctggtgcgtgaggagatgggttcggcgatc
accctgtcggtgccactggaggtgtctgtcggtttcggcaggtcctgggacgacgcggcc
cactga
DBGET
integrated database retrieval system
