Gordonia pseudamarae: GII33_13380
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Entry
GII33_13380 CDS
T07482
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
gpd
Gordonia pseudamarae
Pathway
gpd00470
D-Amino acid metabolism
gpd00550
Peptidoglycan biosynthesis
gpd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GII33_13380 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GII33_13380 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gpd01011
]
GII33_13380 (murD)
Enzymes [BR:
gpd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
GII33_13380 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
gpd01011
]
Precursor biosynthesis
Amino acid ligase
GII33_13380 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
AlaDh_PNT_C
Thi4
Motif
Other DBs
NCBI-ProteinID:
QHN26797
LinkDB
All DBs
Position
complement(3066950..3068497)
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AA seq
515 aa
AA seq
DB search
MRRTPIVELTVGEVVVGGAGVAGSSAARHLLAADVPVVVADTRFADAQDAGVPVAAELRA
AGARCVGIDELLADPGWTDRTGLVVVSPGFAPTHQLVVAAAAAGVPVWGEVELAWRIDRA
GWFGTPRTWLVVTGTNGKTTTTSMLESIVSADGRVAAACGNIGLPVLDALATEPRAEVLC
AELSSFQLHWAPSIVPDAGVVLNVAEDHLDWHGSFGAYRDAKATALHGRVGVVGLDDAVA
SGIETGTATRRVGFTLAAPDAGQLGVDDGVLVDRAFGAGRLIPAAQVRPAGPSGCSDALA
AAALALAVGVAPLSVTAGLTDFTPAAHRGEVVETIDGIDFVDDSKATNPHAARAAIAAHD
RVVLIAGGLLKGASVDDLFVEMRDRLAGAVAIGTDRDVIIDSIARHAPDVPAVTVFTGDD
GAVNVQRFVAGVPVAENPGPAGAESPADLVMRHAVRQAWRLAVEANSAPGSEPVEAVLLA
PAAASLDMFAGYGRRGDSFAVAARGLRGTDVSASR
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcggaggacaccgatcgtggagctgaccgtcggcgaggtcgtcgtcggcggcgcgggg
gtcgccggctcgtcggcggcccggcacctgctggcggccgatgtgccggtggtcgtcgcg
gacaccaggttcgccgacgcgcaggatgccggtgttccggtcgcggcggagctgcgggcg
gcgggtgcccggtgcgtcgggatcgatgaactgctcgccgacccggggtggaccgaccgc
accggtctggtggtcgtctcgccgggtttcgcgccgacgcatcagctggtcgtggccgcc
gccgcggccggcgtaccggtgtggggtgaggtggaactggcctggcggatcgatcgggcc
ggctggttcggcacgccgcgcacctggctggtggtgaccggtaccaacggcaagaccacc
accacctcgatgctggaatccatcgtctcggcggacggccgggtggccgcggcctgcggg
aacatcggtctgccggtgctggacgcgttggccaccgaaccccgcgccgaggtgctctgc
gccgaattatcgtcctttcagctgcactgggcgccgtcgatcgtgccggatgccggtgtg
gtcctcaacgtcgccgaggaccatctcgactggcacggctcattcggcgcctatcgggac
gccaaggcgaccgccctgcacgggcgggtcggcgtcgtcggcctcgacgacgcggtggcg
tcggggatcgagaccggaaccgccacccgccgcgtcggcttcacgctggcggcacccgat
gccggacaactcggcgtcgacgacggggtactcgtcgatcgggcgttcggggcgggccgg
ctgatcccggcggcacaggtgcgcccggcgggcccgtccggctgctcggatgccctggcc
gccgcggcactggcattggcggtgggcgtcgcgccgttgtcggtgacggccggactgacc
gacttcaccccggccgcacatcgcggcgaggtcgtcgagaccatcgacggaatcgatttc
gtcgatgattcgaaggccaccaacccgcatgcggcgcgggcggcgatcgccgcccacgac
cgggtggtgctcatcgcgggtggactgctcaagggtgcctcggtcgatgatctgttcgtc
gagatgcgtgatcggctcgccggggcggtggcgatcggcacggatcgggacgtcatcatc
gactcgattgcacgacacgccccagatgtcccagctgtcacagtgttcacaggtgacgat
ggtgcggtgaatgtgcagcgattcgtcgccggagtcccggttgccgagaaccccggtccc
gccggggctgagtccccggccgatctggtgatgcggcacgcggtgcgccaggcgtggcgt
ctggcggtcgaggcgaacagcgctccgggctcagaaccggtcgaggcggtcctgctcgcc
cctgccgcggcctcgctcgacatgttcgccggctacggccgtcgcggcgattcgttcgcc
gtcgcggcccgagggctgcggggtacggacgtatcggcgtcgcgatga
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