Gordonia pseudamarae: GII33_14610
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Entry
GII33_14610 CDS
T07482
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
gpd
Gordonia pseudamarae
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gpd03032
]
GII33_14610
03036 Chromosome and associated proteins [BR:
gpd03036
]
GII33_14610
03400 DNA repair and recombination proteins [BR:
gpd03400
]
GII33_14610
DNA replication proteins [BR:
gpd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GII33_14610
Chromosome and associated proteins [BR:
gpd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GII33_14610
DNA repair and recombination proteins [BR:
gpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GII33_14610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-HIG
HU-CCDC81_bac_2
Mitofilin
Saf4_Yju2
Motif
Other DBs
NCBI-ProteinID:
QHN27002
LinkDB
All DBs
Position
complement(3324321..3324965)
Genome browser
AA seq
214 aa
AA seq
DB search
MNKAELIDELTKKLDADRKTATEAVELVVDTIVRAVHRGESVTITGFGVFEKRKRAPRVA
RNPRTGETVKVRATSVPAFRPGAQFKAVVAGKQKLSATGPAVKRGSAASTAAAKKAAAKK
TTAAKKTTTTAAAKKTTAAKKTTTTAAAKKTTAAKKTTTTAAAKKTTTTAAAKKTTAAKK
APAKTTTAAKKTTAAKKTTAAKKAPAKTTRRSSR
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagagctcatcgacgagctgaccaagaagctcgacgcggatcggaagacc
gcgacagaggcggtcgagctggtcgtcgacacgatcgtgcgcgcggtccatcgcggcgag
agtgtcaccatcaccggcttcggtgtcttcgagaagcgcaagcgcgcaccgcgtgtggcg
cgtaacccgcgcaccggtgagaccgtgaaggtccgggccacctcggtgcccgcgttccgt
ccgggtgcgcagttcaaggctgtcgtcgccggaaagcagaagttgtcggctaccggcccg
gccgtcaagcgcggcagtgccgccagcaccgcggccgccaagaaggccgcggccaagaag
accaccgcggccaagaagaccaccaccaccgcggctgccaagaagaccaccgcggccaag
aagaccaccaccaccgcggctgccaagaagaccaccgcggccaagaagaccaccaccacc
gcggctgccaagaagaccaccaccaccgccgcggcgaagaagaccacggccgccaagaag
gctccggcgaagaccaccaccgcggccaagaagaccaccgcggcgaagaagaccacggcc
gccaagaaggctccggcgaagaccacccgccgcagcagccgctag
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