Gordonia pseudamarae: GII33_16970
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Entry
GII33_16970 CDS
T07482
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gpd
Gordonia pseudamarae
Pathway
gpd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GII33_16970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gpd03021
]
GII33_16970
03400 DNA repair and recombination proteins [BR:
gpd03400
]
GII33_16970
Enzymes [BR:
gpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GII33_16970
Transcription machinery [BR:
gpd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GII33_16970
DNA repair and recombination proteins [BR:
gpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GII33_16970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QHN27386
LinkDB
All DBs
Position
complement(3835602..3836654)
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPALTEEIVAENRSKFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAITSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYVRKQGPGTVTGADIVPPAGVTVHN
PDLHIATLNDKGKLEIELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLVLDVETKNSISARDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIQSFSLPIEELELTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKVK
LHALGLSLKDSPASFDPSQVAGYDPATGTWSDDATFSDEGGEDFAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctcatctcacagcgacctgccctcaccgaagagatcgtcgccgagaatcggtcgaag
ttcgtcatcgaaccgctcgaacccggtttcggctacaccctcggtaactcgctgcgccgt
accctgctctcgtcgatcccgggcgctgccatcaccagcatccgcatcgacggtgtcctg
cacgagttcaccaccgtccccggcgtgaaggaggatgtcaccgacatcatcctgaacctc
aagggcctcgtggtgagctccgaggaagacgagccggtcaccatgtacgtgcgcaagcag
gggccgggcaccgtgaccggcgccgacatcgtgcccccggccggtgtcaccgtgcacaac
cccgatctgcacatcgccaccctcaatgacaagggcaagctcgaaatcgagctcgtcgtc
gagcgtggccgcggttatgttcccgcggtgcagaacaaggcgtcgggtgccgagatcggc
cggattccggtcgactcgatctactcgccggtcctgaaggtcacctacaaggtcgaggcc
acccgcgtcgagcagcgcaccgacttcgatcggctcgtgctcgacgtcgagaccaagaac
tcgatcagcgcacgcgatgcgctggcgtcggcgggcaagaccctcgtcgagctgttcggg
ctcgcccgggagctcaacgtggaggccgagggcatcgagatcgggccgtcgccggccgaa
gcggatcacatccagtcgttcagcctgccgatcgaggagctcgagctcaccgtccggtcg
tacaactgcctcaagcgcgaaggtgtgcacaccgtcggcgagctggttgcccgcaccgag
tcggacctgctcgacatccgcaacttcggccagaagtcgatcgatgaggtgaaggtcaag
ctgcacgcgctgggtctgtcgctcaaggacagcccggccagcttcgacccgtcgcaggtc
gccggttacgacccggccaccggcacgtggtcggacgatgccacgttcagcgatgaaggc
ggcgaggatttcgcagagaccgaacaactctga
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