Gordonia pseudamarae: GII33_19660
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Entry
GII33_19660 CDS
T07482
Name
(GenBank) IS3 family transposase
Organism
gpd
Gordonia pseudamarae
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
rve
HTH_21
HTH_Tnp_1
rve_3
HTH_23
HTH_28
rve_2
HTH_29
MerR_1
DivIC
Motif
Other DBs
NCBI-ProteinID:
QHN27869
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Position
join(4528215..4528560,4528560..4529473)
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AA seq
419 aa
AA seq
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MARRHYSEQFRQDAVDLYESTPGATVRGIAADLGVERGTLRHWLERYGTGRKTAADGSGA
VSPLKARNGDGPAVVGPESAEAKIARLERENAALRSEKLKLSTEREILRQAAKYFGRGDE
LVSRFQFVADHLDTYPVKWLCDLLEIACSSFYAWRKAAPRRAARAEADHVLAQRIREVHD
GDSTCGAPRITAELNDGVALENRVNHKRVARVMRAHGIVGYRRRRRVVTTIPEPADRIVP
DLVERDFTAPATNRVYVGDITYLPIADGSNLYLATVIDCYSRRLTGWAVADHMRTDLVAD
ALQAAQQTRGSLSGAVFHSDHGSVYTSKAYANLCAELGVTQSMGAVGTSADNAMAESFNA
TLKREVLQDEQSWPDEFTCRREVFGWLVRYNNRRRHSWCGHQSPLTYENRYAATLLHAA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggctcggagacactattcagagcagtttcgtcaggacgcggtggacttgtacgagtcg
acccccggggccacggtgcgcggtatcgccgccgatcttggggtcgagcgcggcacgttg
cgtcactggcttgagcgctacggcaccggccgcaagaccgctgccgatggcagcggggcg
gtcagcccgctcaaggcccgcaacggcgatgggcccgctgtggtggggccagaaagcgct
gaggccaagatcgcacggttggagagggagaacgcggcactgcgtagcgagaagctcaag
ctgagcaccgaacgggagattttgcgtcaggcggccaagtatttcggccggggagacgaa
ctggtgagccgcttccagttcgtcgccgaccacctcgacacctacccggtcaagtggcta
tgcgatctcctcgagatcgcgtgttcgtcgttttacgcctggcgcaaggcggccccgcgc
cgggcggctcgtgcggaagctgatcatgttttggcgcaacgtattcgtgaggttcacgat
ggtgacagcacctgtggtgcaccgcggattaccgcggaactcaacgatggggtggcgctg
gagaaccgggtcaatcacaaacgggtggcgcgggtgatgcgcgcccacggcattgtcggt
tatcggcggcgccgtcgtgtggtcaccacgatccctgaacctgccgatcgcatagtccct
gacctggtggaacgcgatttcaccgcgcccgccacgaaccgggtgtatgtcggcgatatc
acgtatctgccgatcgccgatggctccaacctgtacctggctacggtgatcgactgctac
tcccgacggttgacggggtgggcggtggccgatcatatgcgcaccgatctcgttgccgat
gccttgcaagcggcacaacagacgcgagggtcgttgtcgggagcggtctttcactccgat
cacggctcggtctacaccagcaaggcctacgccaacctgtgcgctgaactcggcgtgacc
cagtccatgggagcggtgggcaccagcgccgacaatgcgatggccgagtcgttcaacgcc
acgctcaaacgcgaggtccttcaagatgagcagtcctggcccgatgagttcacctgccgg
cgtgaagtctttgggtggctcgtgcgttacaacaaccgccgaagacactcgtggtgcggg
caccaatcaccactcacctacgaaaaccgttacgctgctacacttctacacgcagcataa
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