Gordonia pseudamarae: GII33_20240
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Entry
GII33_20240 CDS
T07482
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
gpd
Gordonia pseudamarae
Pathway
gpd00730
Thiamine metabolism
gpd01100
Metabolic pathways
gpd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
GII33_20240 (thiC)
Enzymes [BR:
gpd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
GII33_20240 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QHN28845
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All DBs
Position
4654349..4656007
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AA seq
552 aa
AA seq
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MTTGPIAGSHKQYIDADGLRVPQRRIELTNGDHLDVYDTSGPYTDPTADIDVERGLPPVR
DSWHRPEPVAAGPETGPTRLASTQLSWARAGIITDEMRFVAAREGFDPEVVREEVAAGRA
VIPANHRHPESEPMIIGKRFAVKVNANIGNSAVRSDISEEVEKMVWATRWGADTIMDLST
GKEIHLTREWIMRNSPVPVGTVPIYQALEKVNGDPTKLTWELYRDTVIEQAEQGVDYMTV
HAGVLLRYVPLTARRVTGIVSRGGSIMAAWCLAHHEESFLYTHFGELCEIFAQYDITFSL
GDGLRPGSIADANDEAQFSELRTLGELTSIAKSYGVQVMIEGPGHVPMHKIVENVRLEEE
LCEEAPFYTLGPLATDIAPAYDHITSAIGAAMIAQAGTAMLCYVTPKEHLGLPNRDDVKV
GVITYKIAAHAADLAKAHPRAQERDNALSQARFEFRWTDQFNLALDPDTAREYHDETLPA
EPAKTAHFCSMCGPKFCSMRISADVRTYAEENNLVTAEDIDRKIAEEMAAKSAEFADQGN
RVYLPLEATATH
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atcaccaccggccccatcgccggcagccacaagcagtacatcgacgccgacggtctgcgg
gtaccgcagcggcgcatcgaactcaccaacggcgaccacctcgacgtgtacgacacgtcc
gggccgtacaccgacccgacggccgacatcgacgtcgaacgcgggctgccgccggtccgc
gactcgtggcaccggcccgagccggtggccgccggaccggaaaccggccccacccggctg
gcatcaacccaattatcctgggccagagccggaatcatcaccgacgaaatgcgtttcgtg
gcagctcgcgaaggcttcgaccccgaggtcgtccgggaggaggtggccgccggacgtgcc
gtgatccccgccaaccatcgccacccggagtccgaaccgatgatcatcggcaagcgcttc
gcggtgaaggtgaacgccaatatcggcaattctgctgtgcgcagcgatatctcggaggag
gtggagaagatggtgtgggccacgcgctggggcgcggacaccatcatggacctgtcgacc
ggcaaggagatccacctcacccgcgaatggatcatgcgcaactcacccgtaccggtgggt
accgtgccgatctaccaggcactggagaaggtgaacggcgatcccaccaaactcacctgg
gaactctaccgcgacacggtgatcgagcaggcagaacagggcgtcgactacatgacggtg
catgccggcgtgctactgcggtacgtaccgctcaccgcccgccgggtcaccggcatcgtc
tcgcgcggcggctcgatcatggccgcctggtgtctggcacaccatgaggaatcgttcctg
tacacccacttcggcgaactgtgcgagatcttcgcacagtacgacatcaccttctccctc
ggtgacggcctgcgtcccggctccatcgccgacgccaacgacgaggcccagttctccgag
ctgcgcaccctcggcgaattgacatcgatagcgaaaagctatggcgtgcaggtgatgatc
gaaggtcccggacacgtgccgatgcacaagatcgtcgagaacgtccggctcgaggaagaa
ctgtgcgaggaggcaccgttctataccctcggaccgttggccaccgacatcgcacccgcc
tacgaccacatcacctccgctatcggcgcggccatgatcgcccaggccggcaccgcgatg
ctctgctacgtcaccccgaaagagcatctgggactgcccaaccgggacgacgtgaaggtc
ggtgtgatcacctacaagatcgccgcccacgccgccgacctggccaaggcgcacccccgc
gcccaggaacgcgacaacgcgctctcgcaggcgcgtttcgagttccggtggaccgatcag
ttcaacctggccctcgacccggacaccgcccgtgaataccacgacgagacactgcccgcc
gaaccggcgaagaccgcgcacttctgctcgatgtgcgggcccaagttctgctcgatgcgc
atcagcgccgacgtccgcacctacgccgaggagaacaacctggtgaccgccgaggacatc
gaccgcaagatcgccgaggagatggcggccaagtctgcggagttcgcggaccagggcaat
cgcgtgtatctgccgttggaagccaccgcgacgcactga
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