Gordonia pseudamarae: GII33_20295
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Entry
GII33_20295 CDS
T07482
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
gpd
Gordonia pseudamarae
Pathway
gpd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GII33_20295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpd03400
]
GII33_20295
Enzymes [BR:
gpd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
GII33_20295
DNA repair and recombination proteins [BR:
gpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GII33_20295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QHN27964
LinkDB
All DBs
Position
4665002..4665772
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AA seq
256 aa
AA seq
DB search
MRIGAHLREDTDPLGMAAELGIDLFQMFVTDPQSWKKPAPNPRAQEFRESAIDVVVHSSY
SINVASLNNRLRMPSRKAVEQQAEAAADLGAFGLVVHGGHLRDGEDRMAGFVNWHKLFER
QVDKGGFGVPILIENTAGGDHAMARTLESIDRLWSEVGEFEQAGFCLDTCHAWAGGEDLI
GLVERVKAITGRIDLVHLNNSRDEFDSRRDRHANLESGRIDAAVLAEVARTADAPIILET
PTEGIPADLTYLRDRL
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcggagcccaccttcgcgaagacaccgacccgctcggcatggcggccgaactc
ggcatcgaccttttccagatgttcgtcaccgacccgcagagctggaagaagcccgccccc
aacccgcgtgcgcaggagttccgcgaatcggcgatcgacgtggtggtgcattcgagctac
tcgatcaacgtcgcgagcctgaacaaccggctgcggatgccctcgcgcaaggctgtcgag
cagcaggccgaggccgccgccgatctcggcgcgttcgggctggtggtgcacggtggacac
ctccgcgacggcgaggaccggatggccggattcgtcaactggcacaagctcttcgaacgt
caggtggacaagggcggcttcggcgtgccgatcctgatcgagaacaccgcgggcggcgat
cacgcgatggctcgcacgctcgaatccatcgaccggctctggagcgaggtcggcgagttc
gagcaggccgggttctgcctcgacacctgccacgcgtgggcgggcggggaagacctgatc
ggactcgtcgagcgtgtcaaggcgatcaccggccggatcgacctggtacacctgaacaac
tcccgcgacgagttcgactcgcgccgcgaccggcacgccaacctcgaatccggccgcatc
gatgccgccgtcctggccgaggttgcccgcaccgccgacgcgccgatcattctggagacg
cccaccgagggcattccggccgacctgacgtatctccgcgaccgcctctga
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