Gordonia pseudamarae: GII33_20495
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Entry
GII33_20495 CDS
T07482
Name
(GenBank) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
gpd
Gordonia pseudamarae
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
GII33_20495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
WHD_HRQ1
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QHN28853
LinkDB
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Position
4714274..4716628
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AA seq
784 aa
AA seq
DB search
MTHVSVINSTTANFADWPTWVPNTLVQALEHQGISRPWVHQERAASLAHNGSHVIVSTPT
ASGKSLAYQLPILTALLADPRATALYIAPTKALGADQIRAVAALTAGRPEFGHLQPCAYD
GDTETDIRQWARAHSRWIFTNPDMLHVGILSTHPRWRHFLRNLRYIVIDECHHYRGVFGS
HTALVMRRLLRLARAAGASPVVVASSATAAHPAESLSRLIGEPAVAVTEDGSPHGERTLA
LWQPGFVPAVTGENGAPVRRSAGAESARLLADFVIEGARTLCFVRSRMGAELNARQARQI
LAAAAPELVDKVAAYRAGYLADDRRRLERAIDDAELTGVATTNALELGIDISGLDAVIVA
GYPGSIASFWQQAGRAGRQHHSGDSLVVLVARDDPLDTYLVNNPPALLDKPVEAAVTDPA
NPYILGPHLLCAAAELPLTERDVDDWGARTVVDELTARGALTRRRLPTRGADRPRPHPGS
ATTGWYVSAGIEPHAQVNLRGGSGEEVLIVDTTTGRLLGTVDAVRAMSTVYAGAVHIHQG
ETFVVDEFDLDDGLALTHPEEPDWTTSARETTGISVDRVISERRYGPLTVAFAEVTVTHQ
VIGYLRTLLTGEVLDSVPLDMPEQTLPTRAVLYTLTPRALADAGIDPAAPAGALHAAEHA
AIGLLPLVATCDRGDIGGLSTTLHPDTGLPTVFVYDGHLGGAGFAERGHDTFARWIGATR
EAIASCRCAAGCPSCVQSPKCGNGNDPLDKSGAIAALTLIQRCLSDAAADPGEPAVTAPT
ASVQ
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
ctgacccatgtatccgtaatcaactccacgacagcaaatttcgccgactggccgacatgg
gtaccaaatacccttgtgcaagcattggaacaccaagggatttcacgcccctgggtgcat
caggaacgggccgcatccctcgcccacaatggttcgcacgtcatcgtcagcacaccgacc
gcgtcgggcaagtcgctggcgtatcagctgccgatcctgaccgcactgctcgccgatccc
cgcgccacggcgctgtacatcgcgcccaccaaagcgctgggggccgaccagatccgcgcg
gtggccgcgctcaccgccggccggccggaattcggccacctgcaaccctgcgcgtacgac
ggcgacaccgagaccgatatcaggcagtgggcgcgggcgcattcgcgctggatcttcacc
aaccccgacatgctgcacgtggggatcctgtccacccacccacgctggcggcacttcctc
cgcaaccttcgctacatcgtcatcgacgaatgtcaccattatcggggggttttcggatcg
cacacggcgttggtgatgcgccgactactccgcctcgcgcgggccgccggggcctccccg
gtggtcgtcgcctccagtgccaccgccgcccaccccgccgaatccctgtcccggctcatc
ggcgaacccgccgtcgccgtcaccgaggacggctcaccgcacggcgaacgcaccctcgcc
ctgtggcagcccggtttcgtccccgcggtcaccggcgagaacggagccccggtccgccgg
tcggccggagccgaatccgcacgactactggccgatttcgtgatcgaaggggcccgcacg
ctgtgctttgtgcgcagccggatgggcgccgaactcaatgcccggcaggcccgacagatc
ctcgccgccgccgcacccgaactggtggacaaggtcgcggcctatcgggccggctacctc
gccgacgaccgcagacgtctcgaacgggccatcgacgacgccgaactcaccggcgtggcc
accacgaacgcgctggagctgggtatcgacatcagcggtctggacgccgtcatcgtcgcc
ggctatccgggcagcatcgcctcgttctggcagcaggccggacgagccgggcggcaacac
cattcgggtgattcgctggtggtgctcgtcgcccgcgacgaccccctcgacacctacctg
gtgaacaatccgccggcgttgctcgacaaacccgtggaggcggccgtcaccgaccccgcc
aatccgtacatcctggggccgcatctgctgtgcgcggccgccgaactgccgttgaccgaa
cgcgacgtggacgattggggcgcccgtacggtggtcgacgaactcacggcgcgaggcgcg
ctcacacgccgccggctaccaacgagaggcgcggatcgtcctcgtccacatcctggatcg
gctacgacggggtggtacgtcagtgccggaatcgagccgcacgcgcaggtcaacctgcgt
ggcggcagcggcgaggaggtgctcatcgtcgacaccaccaccgggcgtctgctgggcacc
gtcgacgcggtgcgcgcgatgtcgacggtgtacgcgggtgcggtgcacatccaccagggc
gagacgttcgtcgtcgacgagttcgacctcgacgacggcctggcactgacccatcccgaa
gaacccgactggacgacgtcggcccgcgagaccaccgggatctcggtggacagggtgatc
tccgaacgccggtacggcccactgaccgtcgccttcgcggaggtgaccgtgacccaccag
gtgatcggctacctgcgcaccctgctcaccggcgaggtcctcgactcggtccccctggac
atgccggaacagacactgccgacgcgtgcggtgctgtacaccctcaccccgcgggcactg
gccgatgcgggcatcgatccggcggcaccggccggcgcgctgcatgccgccgaacacgcc
gcgatcgggctgctgccactggtggccacctgcgaccgcggcgacatcggcggtctgtcg
accaccctgcatcccgataccggcctgccgacggtgttcgtctacgacggacatctcggc
ggcgccggattcgccgaacgcggtcacgacaccttcgcccggtggatcggcgcgacccgc
gaggccatcgcctcctgccggtgcgccgcgggctgcccgtcgtgcgtgcagtcaccgaaa
tgcggcaacggcaacgacccgctcgacaagtcgggcgcgatcgccgcgctcaccctcatc
cagcggtgcctgtcggacgcggcggccgaccccggcgaacccgcggtgaccgcccccacg
gcatcggtacagtaa
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