Gordonia pseudamarae: GII33_20980
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Entry
GII33_20980 CDS
T07482
Name
(GenBank) IS200/IS605 family element transposase accessory protein TnpB
KO
K07496
putative transposase
Organism
gpd
Gordonia pseudamarae
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
GII33_20980
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
DUF4398
zf-piccolo
Motif
Other DBs
NCBI-ProteinID:
QHN28080
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Position
4811049..4812197
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AA seq
382 aa
AA seq
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MQLRYQYRVYPTPGQQNRLAQAFGCARVVFNDALRARQVAYQAGLKLSDTDVQKLVVTEA
KRTPERQWLGEVASVVLVQASQDARRAYRNWFDSMSGKRKGRKVGAPRFRSRKDNRQAIR
LTRNGFSIRANRKLYVAKVGELKVAWSRDLPSEPSSVTIIKDAAGRYFASFVVETSDEPL
PESQFEVGIDLGLTSFAVCSDGRVIDSPKFLRRAERKLRKAQQDLSRKQKGSKNRTKARV
RVAKAHARVADSRKDWAHKLSTTLIRENQAIYVEDLCVTGLARTRLAKSVHDAGWGMFVR
MVEEKAARYGRTVVKVDRFFPSSQLCSVCGAKDGPKPLSVREWTCRGCGAVHDRDLNAAK
NILAEGRSERLNACGETVSLPA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgcgatatcagtaccgcgtctacccgacgcccggacagcagaacaggctggcc
caggcgttcgggtgtgcgcgggtggtattcaacgacgcgctacgggcacggcaggtcgcc
taccaggccgggctaaaactctccgataccgatgtgcagaagctcgtggtcaccgaggcc
aagcgaaccccagagcgtcaatggctgggcgaggtggcatcggtggtgctggtgcaagcc
agccaggacgcgcggcgtgcgtatcgcaactggttcgattcgatgtccgggaaacgcaag
ggccgcaaggtcggcgcacctcgtttccggtcccgcaaagacaatcggcaagcgatccgg
ctcacccgcaacggattctcgatccgtgcgaatcggaagctgtatgtggccaaggtcggc
gaattgaaggttgcctggtcacgcgacctaccgtcggagccatcgagtgtcacgatcatc
aaagacgcggcgggccggtatttcgcatcgttcgtcgtcgagacttcggacgaaccgctg
cccgagtcgcagttcgaggtgggtatcgatttgggtctcacctcgttcgcggtctgctcg
gacggccgggtgatcgactccccgaagttcctgcgccgggccgaacgcaaactccgcaaa
gcacaacaggatctgtcccgcaagcagaaaggatcgaagaaccgcaccaaggcccgtgtg
cgtgtcgccaaagcccacgccagagtggccgactcccgcaaggattgggcgcacaaactg
tccacgacattgatccgcgagaaccaagcgatctacgtcgaggacctgtgcgtcaccggg
cttgcgcggacgcggttggcgaaatcggtgcacgacgccgggtggggcatgttcgtgcgt
atggtggaggagaaagccgcccggtacgggcgcaccgtcgtcaaggtggatcggtttttc
ccgtcgagccaactgtgttcggtgtgcggggcgaaggacgggccgaaaccgctctcggtt
cgggagtggacgtgtcgggggtgtggtgcggtccacgaccgcgacctgaacgctgccaag
aacattctcgcggaggggcgctccgagagactaaacgcctgcggagagacggtcagtctt
cccgcgtga
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