KEGG   Gordonia pseudamarae: GII33_21480
Entry
GII33_21480       CDS       T07482                                 
Symbol
casA
Name
(GenBank) type I-E CRISPR-associated protein Cse1/CasA
  KO
K19123  CRISPR system Cascade subunit CasA
Organism
gpd  Gordonia pseudamarae
Brite
KEGG Orthology (KO) [BR:gpd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gpd02048]
    GII33_21480 (casA)
Prokaryotic defense system [BR:gpd02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    GII33_21480 (casA)
SSDB
Motif
Pfam: CRISPR_Cse1
Other DBs
NCBI-ProteinID: QHN28162
LinkDB
Position
complement(4917969..4919717)
AA seq 582 aa
MAKFDLVEGSSSYDPRQPWRDYMCWARLSVRHRPRSARRTTREELMGTTFNLIDDPWIVI
RTVDGDSEVVSIRDAFARSADIRRIAGDLPTQDFAVLRILLAILYQVFRERAAEGDRIEV
FEGLWESGDLPIDEIDRYLEHWHGRFDLFDETHPFMQVAGLASTTGEAKPLGGILIPDSP
GDNSLFTMSRNVRELDYGTAARWLVHCQAYDYDGIKTGISGDPRTKGGRGYPIGIGWTGW
LGGLYLEGSNLRETLLLNWSPPDDHDAADRPLWERQPLTPAPRPSIGTAPCGPLDLFTWP
VRHIRLIPDGDAVRQVLVGIGEAVPKAWQLRNEPMTAWRLSPTQMVKEKSGGTPLYMPRS
HDHSRSMWRGLAALLPDPKPAVDSRIGHPLSYPAQILDTLGHRSEVLPDRMFAVVSVGVE
YGANMSSFGEIFTDRVVLHPGIAVAEGNARAAIVEVLDRTDRAVAALASLAGDLAIAGGG
DRAPAMTRARERGYAVLDQYFRQWLPMVRTDCDFDDVLNTWYRIGLEVLAQEADALLDQA
SPRTRAVKIVDGKTISAGQSVNWFHYNVRQHLPYRKDAEEWQ
NT seq 1749 nt   +upstreamnt  +downstreamnt
gtggcaaaattcgacctggttgaggggagttcttcctatgatcctcgacaaccatggcgc
gactacatgtgctgggcacgtctttcggtacgacatcgaccgcggtctgctcgtcgaacg
acaagggaagaactgatgggaaccactttcaatttgatcgatgatccgtggatcgtgatc
aggaccgtcgatggtgactccgaggtggtatcgataagggatgccttcgccaggtccgcc
gatatccgtcggatagcaggggatctcccgactcaagactttgcggtgctacgcatccta
ctggcaatcctgtatcaggtgtttcgggagagggctgccgaaggcgaccgtatcgaggta
ttcgaagggctgtgggaatccggggatctacctatcgacgagatcgataggtacctcgaa
cactggcacggtcgatttgacctcttcgatgaaacgcaccctttcatgcaagtcgctgga
cttgctagcacaacaggtgaagcaaaaccgctgggtggaatattgattcctgattctccc
ggagacaacagcctttttacgatgagtcgtaacgttcgcgaattggactacggaacggct
gcacgttggctggtacattgtcaggcgtatgactacgatggaatcaaaaccggaatcagt
ggcgatccccggacgaagggcggcagaggttaccctatcggaattggatggacgggttgg
cttggcggactctacctggagggcagcaatcttcgtgagacgctgttacttaactggtca
ccgccagacgaccacgacgcggcggacaggccactatgggagcggcagccgctgactccc
gctccgcggccaagcatagggaccgcaccgtgcggtccgctcgacctgtttacgtggccc
gtccgccatatcaggctgattcccgacggcgacgctgtccggcaggtgctggtagggatc
ggtgaagctgtgccgaaggcgtggcaactgcgcaacgaaccgatgaccgcatggcggctg
agtccaactcagatggtaaaggagaagtcaggaggtacaccgctttacatgcctcgctcg
catgaccattctcgatcgatgtggcgagggctggctgctctgcttccggatccgaagccg
gcggtcgacagtaggatagggcatccgttgagctatcccgcacagattctcgataccttg
ggacatcgttccgaggtactcccggaccgaatgttcgcggtcgtgtcggtcggggttgag
tacggcgccaatatgtcgagtttcggcgagatattcacagaccgggtggtacttcacccc
gggatagcagtcgccgaaggcaacgcccgagcggccatcgtcgaggtcttggatcgaact
gaccgagcggtggccgcgttggcgtcattggccggtgaccttgctatcgccggtggaggg
gatcgagcaccggcgatgacacgtgcacgggaacgtggatacgcagtactggatcagtac
ttccggcagtggcttcccatggtcagaaccgattgcgacttcgatgacgtgctgaatacc
tggtacaggattgggctagaagtactcgcccaggaagccgatgcgttgctcgaccaagca
tcgccccggacacgtgcggtgaaaatcgttgatggaaagactatttcggccggacagtcg
gtcaactggttccactacaacgtgcgacagcatctaccgtatcgaaaggacgccgaggaa
tggcagtag

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