Gordonia pseudamarae: GII33_22135
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Entry
GII33_22135 CDS
T07482
Name
(GenBank) SpoIID/LytB domain-containing protein
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
gpd
Gordonia pseudamarae
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gpd01011
]
GII33_22135
Enzymes [BR:
gpd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GII33_22135
Peptidoglycan biosynthesis and degradation proteins [BR:
gpd01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GII33_22135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
LGFP
SGP
Motif
Other DBs
NCBI-ProteinID:
QHN28887
LinkDB
All DBs
Position
complement(5079573..5081045)
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AA seq
490 aa
AA seq
DB search
MSLTALGLTPALIAGGLVLGTTLNGADDVDLAVSGSVTMHGHGHGHGRGLGQWGAYGYAK
KGWSAGRILRHYYGGTTAGKADRSEVDVTLTNQSSVSVRAVAGMRVGGQVVAPGQAVSLS
GGTANITNGCGGSVVRSVPATFVEPLTAGPTRPAGELLTFCGSGATYRGALGYSGGRVVN
RVHIDDYVKGVLPKEISPGWADGGGAEAIKAQAVAARTYALAALAGGKQIDDTQNSQVYG
GASVEDPRTNSAADATAGQVRLVNGKPAFTEFSASTGGFTAGGPFPAVEDEGDTISPSHN
WTMTLSPDTVGSAFGVGALRDFEVIEANGLGPQWGRAVKVRVVGTGGTVEVSGEDARTTL
GLKSSYFAIKGQTNKPAIVAPARGTGPAGGILETIFDEVMPGASQLLEVGTQVLNGKFDD
LGGITGVLGQAIGIPALTPDGKGVVQLFQRGMMFFSADTGAHALAGRSLADYLSKGGQPV
VGFPKRDALK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
ctgtcgttgacggcgctgggcctgacacccgcgctgatcgccggcggtctggtcctcggc
accacgctcaacggcgccgacgacgtcgacctggcggtctccggttcggtgaccatgcac
ggtcacggtcacggtcacggtcgtggcctggggcagtggggtgcctacggctatgcgaag
aagggctggtctgccggcaggatcctgcgtcattactatggcggcaccaccgcggggaag
gcggacaggtccgaggtcgacgtcacactgacgaatcagagctcggtttctgtgcgcgcg
gtcgccgggatgcgggtaggcgggcaggtcgtcgcccccgggcaagcggtcagtttgtcc
gggggaacagcaaacatcaccaacggctgcggcggatcggtcgtgcgctcggtgcccgcg
accttcgtcgaaccactgaccgcgggcccgaccagacccgccggtgagctgctcaccttc
tgcgggtcgggcgccacgtatcgcggcgcgctcggctactccggcggacgcgtcgtcaac
cgggtccacatcgatgactacgtcaagggtgtcctgcccaaggagatctcgcccggctgg
gccgacggcggtggagccgaggccatcaaggcgcaggccgtggccgcgcgcacctacgca
ctggccgcgctcgccggcggcaaacagatcgacgatacccagaactcgcaggtctacggc
ggtgcgtccgtagaggacccacgcacgaactccgccgccgacgccaccgccggacaggtc
cgcctggtgaacgggaaaccggcgttcaccgagttctcggcatcgaccggcggtttcacc
gcgggcgggccgttccccgccgtcgaggacgagggcgacaccatttcgccgtcacacaac
tggacgatgacgctgagcccggacaccgtgggcagcgccttcggcgtcggcgcgctgcgc
gacttcgaggtgatcgaggccaacggtctcggcccgcagtggggccgcgccgtcaaggtc
cgcgtggtcggaaccggtggcaccgtcgaggtgagcggcgaggacgcccgcaccaccctc
gggctcaaatcctcctacttcgccatcaagggccagacgaacaagcccgcgatcgtcgcc
ccggcacgcggcaccggtccggccggtggcatcctggagacgatcttcgacgaggtgatg
ccgggtgcgtcacagttgctcgaggtgggcacccaggtgctcaacggcaagttcgacgat
ctcggcggtatcaccggcgtcctcggtcaggcgatcggcattcccgcactcacccccgac
ggcaagggcgtcgtgcagctgttccagcgtggcatgatgttcttctccgccgacaccggt
gcgcacgctctcgccgggcggtccctcgccgactacctcagcaagggcggacagccggtc
gtcggcttcccgaagcgggatgcgctgaaatag
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