Gordonia pseudamarae: GII33_23145
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Entry
GII33_23145 CDS
T07482
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gpd
Gordonia pseudamarae
Pathway
gpd00061
Fatty acid biosynthesis
gpd00071
Fatty acid degradation
gpd01100
Metabolic pathways
gpd01212
Fatty acid metabolism
gpd02024
Quorum sensing
gpd04146
Peroxisome
Module
gpd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gpd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GII33_23145
00071 Fatty acid degradation
GII33_23145
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GII33_23145
09145 Cellular community - prokaryotes
02024 Quorum sensing
GII33_23145
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gpd01004
]
GII33_23145
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gpd04147
]
GII33_23145
Enzymes [BR:
gpd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GII33_23145
Lipid biosynthesis proteins [BR:
gpd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GII33_23145
Exosome [BR:
gpd04147
]
Exosomal proteins
Exosomal proteins of breast milk
GII33_23145
Exosomal proteins of breast cancer cells
GII33_23145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QHN28981
LinkDB
All DBs
Position
p1:89479..90960
Genome browser
AA seq
493 aa
AA seq
DB search
MSRSPTPTVILAHTNGTLEQRTQQQCLHRAALLADHLAAEQLVRVGDRVAILACNSIEFL
EISIGVAGAGGCPVPINWHATSHEIAHVLSDSGTSVLFCDPDLHQRAAHAIMRAGVRCAV
FLTTANDSDIPALDDLIGAAAGPIGHIDGALAASLGVIYTSGTTGSPKGVDRELMTPAQI
LSVAGSTATRMGIRDGGCVLIPGPLYHTSPNSIATLALRMGSTLVLMERFDAEQFLSLVE
QFAVEHAKVVPTMLSRLAALPADVRDRYDVSSLTHVVHSAAPCPPTIKHAAIGMFGDAVT
EFYGCSEAGPICWISAAEWLTRPGSVGRPVDGADVRVVDDQGEVVPVGTVGHVQVKGADY
WPRFRYIGDGRLQPQFLDVGDNGYLDEDGYLYLTGRSADIVNIGGTNIYTAEIEAAAIDH
PDVLDAAALGTPTGGDLGEEITLYVVPRSAELDMVALVEHLTQRLSTVKLPSVIRERTDL
PRDDNGKLYKARL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgctcaccgacgcccaccgtcatcctcgcccacaccaacggcacgctggaacaa
cgaacccagcagcagtgcctgcatagagcagcactcctggctgaccatctcgcggccgaa
cagctcgtcagggtgggtgatcgggtcgcgatcctggcatgcaacagcatcgagttcctg
gagatctcgatcggcgttgccggggccggcgggtgcccggtgccgatcaactggcacgca
acctcccacgagatcgcgcacgtcctcagcgacagcggtacctccgtgctcttctgcgac
cctgatctccaccagcgtgcggctcacgcgatcatgcgtgcgggcgtgcgctgcgcggtg
ttcctcaccactgccaacgacagcgacatccccgccctcgacgacctgatcggtgcggcc
gccggaccgatcggccacatcgacggcgcgctcgccgcctcgctcggggtcatctacacc
tcgggaaccactggatcaccgaaaggtgttgaccgcgagctgatgacaccggcgcagatc
ctgtcggtggccgggtcgaccgcaacccggatgggtatccgcgatggcggctgcgtgctc
attcccggaccgctctaccacaccagcccgaattccattgcgacgctggcgctgcggatg
gggtcgacgctggtgctgatggaacgtttcgacgccgagcagttcctgtcgcttgtcgag
cagttcgccgtagaacacgccaaggtggtaccgacgatgttgtctcggctggccgccctc
ccggccgacgtccgggaccggtacgacgtgtcgagcctgacgcatgtggtgcattcggcc
gccccatgtccgcccacgatcaaacacgccgccatcggcatgttcggcgacgccgtcacc
gagttctacggctgctccgaagccggccccatctgctggatctcagcagccgaatggctc
acccgccccgggtcggtgggcagaccggtcgacggcgccgacgtccgcgttgtcgacgac
cagggcgaggtggtgcccgtcgggaccgtcggccacgtgcaggtcaagggggccgattac
tggccccgtttccgctatatcggcgacggccggctccagccccagttcctcgatgtcggt
gacaacggctacctcgacgaggatggctacctgtatctgaccggccgcagcgccgacatc
gtcaacatcggcggcaccaacatctacaccgccgagatcgaagcagccgccatcgaccac
cccgacgttctcgacgccgccgcgctcggaacacccaccggcggcgacctgggtgaggaa
atcaccctctacgtggtcccccgctcagcagagctggatatggtggcgttggtcgagcat
ctgacacaacgactgtcgaccgtcaagctgccgagcgtcatacgagagcgaaccgacctg
ccccgggacgacaacggaaagctctacaaagcccgactctga
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