Gemmatimonas phototrophica: GEMMAAP_03715
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Entry
GEMMAAP_03715 CDS
T04580
Name
(GenBank) hypothetical protein
KO
K06980
tRNA-modifying protein YgfZ
Organism
gph
Gemmatimonas phototrophica
Brite
KEGG Orthology (KO) [BR:
gph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gph03016
]
GEMMAAP_03715
Transfer RNA biogenesis [BR:
gph03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
GEMMAAP_03715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
GCV_T_C
GreA_GreB
HAD
Motif
Other DBs
NCBI-ProteinID:
AMW04186
UniProt:
A0A143BGK8
LinkDB
All DBs
Position
complement(907685..909274)
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AA seq
529 aa
AA seq
DB search
MHAVLDAAAAESQVLDANTVAAALPGRTFLEASLALFPALAASDPTVPELIALRAQRGYR
ALVQHGVSFDAEMVARLQRAAAAGHRVVVRADSERRDVEPLLALAGLDHHVSLLRCSDDA
PRGPGDTIRRSWDTIHDRLNAMQIAVTARSAWEMTPYTAAVAADYVATVTEPTTSPASSA
PTLVYPEPLVGDDVEAYLDLRRDAAWFEAMNHWSTIQGPKAMEALNGLVTNDVSQLAVGM
GMHAVALTPKGKVVCDMYIARTHDDRFMLTVLRHCAPAWLDLARKYINPRLAKVIDESDQ
WATWMVYGANAVQAVANLGGAMHTVENLGDIMVSGLQEWPVWSHGMWNIGPVSVRLVRAP
VMGSLPGFVIMADVRDAEIVRERLEASTRRRASRAVWNIARVEGGRPAFGVDMDENTIPQ
EANLDTLGAISFTKGCYTGQETVARVHFRGHVNRHLRGLMAEQPMPQHARVADATGKDVG
DVRSSVISPRLGPIAMAMIRREVSPGDTVTVVVPAGDITARVVELPFDE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgccgtcctcgatgcggcggccgcggagtcgcaggtgctcgatgcaaataccgta
gcggcggcactgcccggccgcacgtttctcgaagcgtcgctggcgttgttccccgcgctt
gccgccagcgaccccacggtgcccgagttgattgcgctgcgggcacagcggggctaccgg
gcgctggtgcaacacggcgtatcgttcgatgcggagatggtggcccgactccagcgcgcc
gccgccgccggccaccgggtggtggtgcgggccgacagtgagcggcgcgatgtggaaccg
ctgctcgctctggcaggactcgaccaccacgtatcactgctgcgctgcagcgatgacgcc
ccccgcggccctggtgacaccattcggcgcagctgggacaccatacacgaccgcctgaac
gccatgcagatcgccgtgacggcgcggtccgcctgggaaatgacgccgtatacggcggcg
gtggcggctgattatgttgcgactgtgaccgagccaaccaccagtcctgcatcgtctgcg
cccaccctcgtgtaccccgagccgctcgtgggtgacgacgttgaggcctatctcgatctg
cgccgtgatgccgcgtggtttgaggccatgaaccattggagtaccattcagggcccgaag
gccatggaggcgctcaatgggctggtcaccaacgatgtgagccagctggcagtgggcatg
gggatgcacgccgtggcgctgacccccaaggggaaagtggtgtgcgacatgtacatcgcg
cgcacccacgacgaccgtttcatgctcaccgtgctgcggcactgcgcgccagcgtggctc
gatctggcccgcaagtacatcaatccacgcttggccaaggtcatcgacgagtccgatcag
tgggccacctggatggtctacggcgccaatgccgtgcaggcggtcgccaatcttggcggc
gccatgcacaccgtggagaacctcggcgacatcatggtgagcggcctccaggagtggccc
gtctggtcacatggcatgtggaacattggcccggtcagcgtgcgtctcgtgcgtgcgccc
gttatgggcagcctgccaggcttcgtcatcatggctgatgtccgcgatgccgagattgtg
cgggagcgactcgaagcgtccacacgccgccgcgcgtcacgcgccgtgtggaacattgcg
cgcgtggaaggcggccgccccgccttcggcgtcgatatggacgagaataccattccgcag
gaagccaacctcgacaccctcggcgcgatctccttcaccaaaggctgctacaccggccag
gagaccgtggcgcgcgtgcacttccgcggacatgtgaatcgccacctgcgcggactcatg
gccgagcagcccatgccgcagcatgcgcgcgtggccgatgccaccggcaaggacgtgggc
gatgtgcgcagcagcgtgatctcgcctcgactgggccccatcgccatggccatgatccgc
cgagaggtctcgccgggagacacggtgacggtcgtcgtgccggcgggcgacatcacggcc
cgcgtcgtcgagctgccgtttgatgagtag
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