Gemmatimonas phototrophica: GEMMAAP_03920
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Entry
GEMMAAP_03920 CDS
T04580
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
gph
Gemmatimonas phototrophica
Pathway
gph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GEMMAAP_03920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gph03400
]
GEMMAAP_03920
Enzymes [BR:
gph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GEMMAAP_03920
DNA repair and recombination proteins [BR:
gph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GEMMAAP_03920
RecFOR pathway proteins
GEMMAAP_03920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_22
AAA_17
AAA_33
AAA_3
AAA_16
AAA_18
AAA_14
Rad17
TsaE
bpMoxR
nSTAND3
NTPase_1
RNA_helicase
AAA_28
NB-ARC
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AMW04217
UniProt:
A0A143BGP1
LinkDB
All DBs
Position
complement(964414..965442)
Genome browser
AA seq
342 aa
AA seq
DB search
MSRAEITTPEALSEEGLVELSLRPQRLAEFIGQKKVKESLGIAIDAAKARREPLDHILFF
GPPGLGKTTLADLIARELGVNLTTTSGPALEKPGDLVGPLTNLREGDVLFIDEIHRLRPV
IEEFLYPAMEDYKIDIRLSEGPKAQTVTMNIEKFTLVGATTRLGMLTAPMRARFGLVHQL
AFYPVEELEVIVRRTGDVLRVEMDAAGAHEIAKRSRGTPRVANRLLRRVRDYAQVRANGI
ITLDVAQAALSLLDVDHFGLDDMDSRLLRAIIEKFDGGPVGLGTIAAAIGEDAGTIEEVY
EPFLVQHGFLQRTPRGRVATAHAYRHLGFVPPIGSAEQPGLF
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgcggaaatcaccacccctgaggccctctccgaggaggggcttgttgagctg
tcgctgcgcccccagcggctggcggagttcattggacagaaaaaggtcaaggaaagcctt
ggtattgccatcgacgccgccaaggcacgccgggagccgcttgatcacatcctgtttttt
ggtccgcccggactcggcaagaccacactggccgatctgattgcccgcgaattgggggtg
aatctcaccaccacgtccggcccggcgctggaaaagccgggcgacctggtcgggccgctc
acgaacctgcgcgaaggcgatgtgctgttcatcgatgaaatccaccgcctgcgcccggta
atcgaggagttcctctatccggccatggaggattacaagatcgatatccgcctgtctgaa
gggccgaaggcgcagacggtcaccatgaacatcgagaagttcacgctggtgggcgccacg
acccggctggggatgctgaccgcgcccatgcgggcccgttttgggctggtgcaccagctg
gcgttctatccggtcgaagaactcgaagtcattgtgcggcgtaccggtgatgtgttgcgg
gtggaaatggatgcggccggcgcccacgaaattgccaagcgctctcgcggcacgcctcgc
gtggccaaccgcctgttgcggcgcgtgcgcgattacgcccaggtccgggccaacggcatc
atcacgctcgacgtagcacaggcagccctgtcgctcctcgacgtggatcatttcggactg
gacgatatggactcgcgtctcctgcgagccatcatcgaaaagtttgacggtggccccgtt
ggcctcggcaccattgccgcggcaatcggcgaagatgccgggaccatcgaagaggtgtat
gagccgtttctggtgcagcacggatttctgcaacgcacgccgcggggacgagtcgccacg
gcgcatgcgtatcgtcacctgggattcgtcccacccattggcagcgccgaacaacccggc
ctattttga
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