Gemmatimonas phototrophica: GEMMAAP_04450
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Entry
GEMMAAP_04450 CDS
T04580
Name
(GenBank) hypothetical protein
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
gph
Gemmatimonas phototrophica
Pathway
gph00540
Lipopolysaccharide biosynthesis
gph01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gph00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
GEMMAAP_04450
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
gph01005
]
GEMMAAP_04450
Enzymes [BR:
gph01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
GEMMAAP_04450
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
GEMMAAP_04450
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
GEMMAAP_04450
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
GEMMAAP_04450
Lipopolysaccharide biosynthesis proteins [BR:
gph01005
]
Lipid A
GEMMAAP_04450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Epimerase_2
Glyco_trans_1_2
Motif
Other DBs
NCBI-ProteinID:
AMW04290
UniProt:
A0A143BIJ3
LinkDB
All DBs
Position
complement(1092793..1094100)
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AA seq
435 aa
AA seq
DB search
MNPLLRPLYAGAVSLARAAALIAPDAPHKVWRSLRARRGVLARWRQQAAQTRDTQRPLVW
MHAPSVGEGLQARPVAHALREEHPQVQLAYSFFSPSAESFAASIGADLTGYLPFDSAHDA
DAMLDALRPSVLVFVKLDVWPVLVERAAARGIPVLMLSATLAASSGRRGVLSGALLHDAY
GALARVGAIDADHGARLVELGVQYERIVTTGDTRFDQVWQRAQRVSRRSAPVSSTASSRP
TVVAGSTWPADETVLLPAWEQLRKKIPDVRLIIAPHEPTPSHVDSLLRWARAAGFRAATL
SDIERVGDERTADVIVVDRVGVLGDLYANANVAYVGGGFHSAGLHSAIEPAAFGAPVVFG
PGHHMSREAGLLLQAGGAAEVHDVETMRHTLVRWLRDETARAEAGHAAQEIVARERGATQ
RSVSLVAEYLSVGVG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgctgctccgccccctgtacgccggcgcggtgagtctcgcccgtgctgccgcc
ctcattgcacccgacgctccccacaaggtctggcgttcgctacgcgcacgtcgcggtgtg
ctagcgcgctggcgccagcaagcagcacaaactcgcgacacgcagcggccgttggtgtgg
atgcacgccccatccgtgggcgaaggcctgcaggcccgtccggtcgctcatgccctgcga
gaggagcacccgcaggtacagctggcgtattccttcttttcgcccagcgcggaatcgttt
gcggcctcgattggcgccgaccttaccggctatctgcccttcgattcggcccacgacgct
gacgccatgctggacgcgttacggccgtcggtgctggtatttgtgaagctcgatgtgtgg
ccagtactggtggagcgagcggctgcgcgtggtattcccgtgctcatgctgagcgcaacg
ctcgcagcatcatcggggcgacgcggtgtactctcgggggcactgttgcacgacgcctat
ggcgctcttgcgcgcgtgggagcgattgatgcggaccatggtgctcggctcgtagagctg
ggggtgcaatacgaacgcatcgtaaccaccggcgacacgcggtttgatcaggtgtggcag
cgcgcgcaacgggtgagccggaggagcgcgccggtatcctccacggcaagttcgcgtccc
accgtggtggcgggctccacctggccggcggacgagacggtgctgttgccggcgtgggaa
cagctgcgcaagaaaatccccgacgttcggctcatcattgctccgcacgaacccacccca
agccatgtggactcattgctgcgctgggcccgtgcagcaggattccgggccgccaccttg
agcgatattgaacgggtgggcgatgagcgcacggctgatgtcattgtcgtagaccgggtg
ggcgtgctgggcgacctctatgccaacgccaacgtggcgtacgttggtggaggatttcac
tcggctgggttgcattcggccattgagccggcggcgtttggggcgccggtggtctttggc
ccggggcaccacatgagccgtgaagcggggctcttgctccaggccgggggagccgccgaa
gtacacgatgtggagaccatgcggcatacactggtgcgctggctgcgggacgagacggca
cgggcggaggcgggtcacgcagcgcaggagattgtggcgcgggaacgtggagcaacccag
cgcagtgtctcgctggtggccgagtatctgtcggtcggcgttggctga
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