Gemmatimonas phototrophica: GEMMAAP_04740
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Entry
GEMMAAP_04740 CDS
T04580
Name
(GenBank) hypothetical protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gph
Gemmatimonas phototrophica
Pathway
gph00061
Fatty acid biosynthesis
gph00071
Fatty acid degradation
gph01100
Metabolic pathways
gph01212
Fatty acid metabolism
gph02024
Quorum sensing
gph04146
Peroxisome
Module
gph_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gph00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GEMMAAP_04740
00071 Fatty acid degradation
GEMMAAP_04740
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GEMMAAP_04740
09145 Cellular community - prokaryotes
02024 Quorum sensing
GEMMAAP_04740
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gph01004
]
GEMMAAP_04740
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gph04147
]
GEMMAAP_04740
Enzymes [BR:
gph01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GEMMAAP_04740
Lipid biosynthesis proteins [BR:
gph01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GEMMAAP_04740
Exosome [BR:
gph04147
]
Exosomal proteins
Exosomal proteins of breast milk
GEMMAAP_04740
Exosomal proteins of breast cancer cells
GEMMAAP_04740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AMW04339
UniProt:
A0A143BH29
LinkDB
All DBs
Position
complement(1170870..1172678)
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AA seq
602 aa
AA seq
DB search
MGGPRPAPGTINKLFFDAVERYDRADALLYKVQGVWEPTSHRTILERVRRTALGLAKLGI
VPQDRVAILSENRPEWLIADYACLCSLVTDVPIYPTLPAEQIPYILNDSGARAAFVSTAD
QARKIASIRAQAPGLQWVIGFGATKDDGCDLTLADVEALGAADDNAERATTFKETALAVS
PDQLITLIYTSGTTGNPKGVMLTQDNIYSNVVATKETMPVSTTDTALSFLPLSHIFERAG
DYFLFANGVRIAYAESIDTVPVNMSEVKPSLMMSVPRLYEKIYARVLENAVSSGGLKKQI
FFWAKAVGDRWASEKLAGREPGGLLGLQYGLANKLVFSKLRERTGGNIRYFISGGAPLSP
EIAKFFYSAGLVILEGYGLTETSPVISANNLLHYRLGSVGKPIAGVEVKIAKDGEILTRG
PHVMRGYYNNEQATREAISEDGWFFTGDIGVLEDGYLRITDRKKDIIVTAGGKNIAPQPI
ENMLKTNKYVSQAVMIGDKRKFPIVLIVPDWDQLEKWAARSQIVWTSRAELMAMPTIQAK
MEKEVKEQLKGLASYEMPKKVKLIEQDFSIERGELTPTLKVKRRVIDKTYKAQIDELYVG
AD
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaccgcgccccgccccgggaacgatcaacaagctctttttcgacgccgtggag
cgctacgaccgcgccgatgccttgttgtacaaggtgcagggcgtctgggagccaaccagt
catcgcaccattctggaacgtgtacgacgcacggcgctcggcctcgctaaactgggcatc
gtgccacaggatcgcgtggccattctgtcggagaaccggcccgagtggctcattgccgac
tacgcctgtttatgcagtctcgtcacagatgtcccgatctaccccacgctgccagcggaa
cagatcccgtacatcctgaacgacagcggagcacgagccgccttcgtctccacggcggat
caggcacgaaagatcgcgtcgatacgcgcgcaggctccgggccttcagtgggtcatcggt
ttcggcgccacgaaggacgacgggtgtgacctgacgctcgccgacgtcgaagcgcttggc
gcggccgacgacaatgctgaacgggcgacgacgttcaaggagaccgcactcgcggtgtcc
cccgatcaactgatcacgctgatctacacgtcgggcaccacggggaatccgaaaggcgtg
atgcttacgcaggacaacatctattccaacgtggtggccacgaaggaaacgatgccggtg
agcaccaccgataccgcactcagcttcctgccactgagccacattttcgagcgggcggga
gactacttcctgtttgccaacggcgtgcgcattgcgtatgccgaaagcatcgacaccgtc
ccggtgaacatgagcgaagtcaaaccgtcgctcatgatgtcggtgccgcgcctctacgaa
aagatttacgcgcgcgtgctggagaacgcggtctcgagtggcggcctcaagaaacagatt
ttcttctgggccaaagcggttggtgatcgctgggccagcgagaaactggcaggtcgtgaa
ccgggtgggctccttggcctgcagtacggattggccaacaagctggtgttctccaagctt
cgtgaacggacgggcggcaacatccgctatttcatttcaggtggcgccccactctcgccc
gagattgccaagttcttctattcggcggggttggtcatcctggaaggatacggactcacc
gagacctcaccggtgatttccgccaacaatctcctgcattaccgccttggctccgttggc
aagcccatcgcaggcgtggaagtcaagattgcgaaggacggggagatcctgacgcgtggt
ccccacgtgatgcgcggctactacaacaacgagcaggcgactcgtgaagccatcagcgag
gatggctggttcttcacgggggatatcggtgtcctggaagatggctacctgcgcatcacc
gatcgcaagaaggacatcatcgtcacggcgggcggcaagaacattgcgccgcagcccatc
gagaacatgctgaagacaaacaaatatgtctctcaggccgtcatgatcggtgacaagcgg
aagtttccgattgtgctcatcgtgccggactgggatcagctcgagaagtgggcggcgcgc
agtcagatcgtctggacgtcgcgggcagaactgatggcgatgccgacgattcaggcgaag
atggaaaaagaagtaaaggaacagctcaaggggctggccagctacgagatgcccaagaag
gtcaaactcatcgagcaggacttcagcattgagcgcggcgagctgacgcccacgctgaag
gtgaagcgccgggtgatcgacaagacctacaaggcgcagatcgatgagctgtatgtcgga
gccgactga
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