Gemmatimonas phototrophica: GEMMAAP_04860
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Entry
GEMMAAP_04860 CDS
T04580
Name
(GenBank) hypothetical protein
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
gph
Gemmatimonas phototrophica
Pathway
gph03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GEMMAAP_04860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gph03400
]
GEMMAAP_04860
Enzymes [BR:
gph01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
GEMMAAP_04860
DNA repair and recombination proteins [BR:
gph03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GEMMAAP_04860
Prokaryotic type
GEMMAAP_04860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AMW04355
UniProt:
A0A143BIC0
LinkDB
All DBs
Position
complement(1197988..1198692)
Genome browser
AA seq
234 aa
AA seq
DB search
MARSKPAPIHIPLPAEEAAAFRRRLHRWYKQHSRDLPWRTTRDPYRILVSELMLQQTQVS
RVLDFYRRFLERFPDLESLAKARPQRVLEAWEGLGYYARARNLHKLAKHVTSSPSGIIPS
EPVELQALPGVGAYTAGAVASFAYEKRAALVDTNVARVLHRVFAPELNPKSGPGLRRLWQ
LANELLPRTGKVTWTHNQALMELGALVCSARAPKCTVCPVKRQCASVERFVGGD
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggcccgctcaaaacctgcgcccatccacatcccgctcccggccgaagaggccgcggcg
ttccgtcgtcggctgcaccgctggtacaagcagcattcgcgggacctgccgtggcgtacc
actcgcgatccgtaccgcattctggtgtcggagctgatgctgcagcagacgcaggtgtcg
cgggtgcttgatttctatcggcgttttcttgaacgcttccccgatcttgagtcgctcgcc
aaggcacgcccgcagcgcgtactggaagcgtgggaaggccttggctactatgcgcgcgcg
cgcaatctgcacaagctcgccaagcacgtcacgtccagtcccagcggcataattcccagc
gagccggtggagttgcaggcgctccccggcgttggtgcctataccgccggggccgtggcg
tcattcgcctatgaaaagcgtgcggcgctcgtagacacaaacgtggcgcgggtgctgcac
cgcgtgtttgccccggaactgaaccccaagagtggccccggtctcagacgtctctggcag
ctggccaacgaactgctgccgcgcaccgggaaagtcacctggacgcacaatcaggcgctc
atggaactgggtgctctggtctgctcagcacgggcacccaagtgcacggtctgtccggta
aagcgccagtgtgcgagtgtggaacgcttcgtcggcggcgactga
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