Gemmatimonas phototrophica: GEMMAAP_05375
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Entry
GEMMAAP_05375 CDS
T04580
Name
(GenBank) hypothetical protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
gph
Gemmatimonas phototrophica
Pathway
gph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GEMMAAP_05375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gph03400
]
GEMMAAP_05375
Enzymes [BR:
gph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GEMMAAP_05375
DNA repair and recombination proteins [BR:
gph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GEMMAAP_05375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_19
AAA_16
AAA_22
SLFN-g3_helicase
PIF1
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AMW04425
UniProt:
A0A143BII7
LinkDB
All DBs
Position
1300996..1303260
Genome browser
AA seq
754 aa
AA seq
DB search
MRCIEVSLPVPLFRTFTYSVPEGVAWPIAPGSRVLVPFRNRADIGICLGEAEPPEGVILK
PIKAVVDSVPSLPEALLHTARWISDWYAAPLGLTLRSMLPTPLTQANTPAPAGKTQRVVR
IVTELPSLLQREQTFARAKQQRAVFELLEAQGGVAPLEALRVQANCSAGVFTAMAKRGLV
EVRDEVMQRDPFAERAGVAPPPNPSAAQRDVIDAILRGEPGQVFLLHGITGSGKTLVYIE
VLREVLRTPGRSAIVLVPEIALTSQTVDRFRGAFGDAVAVLHSGLSDGERLDAWQSLRRG
ERRIAVGARSALFAPLEGVGVVIVDEEHESSYKQSETPRYHAREAAIVRARAEGALVVLG
SATPSLESWERADRGQAIRLSLPDRAGGAQLPPVQVVDMRVVTKEAVAARNPHAPFDPML
SVFSPTLLAAIESRLHRAEQSLLLLNRRGFAAYVQCHACGDVQVCPHCSISLTYHRVPEA
LVCHYCQYQHDMPSVCPKCASDKLQRRGLGTQQVEKLVAERFPEARIARMDVDTTSGKWA
HTQILDRVGRGEVDILLGTQMIAKGLDFPNVTLVGVIDADTGLNLPDFRASERTFQLLSQ
VAGRAGRGPKGGDVVVQTRMPHAHAVQHALTHDFLGFVREELGARRHPAYPPFVHIANVI
VSGVHQRATAAAATEAAEWVTQLMKRQGLRDLVLVGPAPCPIDRIKDRWRWHFLLKSSQP
KLMTRVARYVAERCPVPKDSELRLVVDRDPVSLL
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgtatcgaagtatctctgcctgtgcccttgttccgcacgtttacctacagcgtg
cccgagggcgtggcgtggcccattgcgccggggtcgcgggtgctggtgccgtttcgcaac
cgggcggacatcggcatttgtctgggagaggcggagccacccgagggggtgatcctcaag
cccatcaaggcggtggtagatagtgtgccgtcgttgccggaggcgctgttgcatacggca
cgctggatcagcgattggtacgcggcgccgttggggctcacgttgcgcagcatgctgccc
acgccgctcacgcaggccaatacgccggcgccagcggggaaaacgcagcgggtcgtgcgc
atcgtgaccgagctgccctcgctgctgcagcgcgaacaaacctttgcgcgggccaagcag
cagcgggcggtatttgagctgctggaagcgcagggcggggtggcgccgctggaagcgctg
cgggtacaggccaactgttcggccggtgtcttcacggccatggccaagcgtgggctggtg
gaggtgcgcgacgaggtcatgcagcgcgatccgttcgcggagcgtgcgggtgtagcgccg
ccgccaaatccgtcggcggcgcagcgcgacgtcattgacgccattctgcgtggtgagcca
gggcaggtgtttctgctgcacggcattaccggcagcggcaagacactcgtgtacatcgag
gtgctgcgcgaagtactgcgcacgcccggacgatcggccattgtgctggtgcccgaaatt
gcgctcacctcgcaaaccgtcgatcgttttcgtggcgcctttggtgacgcggtagcggtg
ttgcattcgggtctcagtgacggcgagcggctggatgcgtggcagtcgctgcggcgcggc
gagcgtcgcattgccgtaggcgcgcggtcagcgctctttgcgccgcttgagggcgtgggc
gtggtgattgtagacgaagagcacgagagcagctacaagcagtcggaaaccccgcgttat
catgcgcgcgaggcggccattgtgcgggcccgcgccgaaggggcgctggtggtgctgggc
agcgctaccccaagtctcgaaagctgggagcgggccgatcgcggccaggccattcgcttg
tcgctccccgaccgcgcggggggagcgcagctgccgccagtgcaggtggtggacatgcgc
gtggtcaccaaagaagcggtcgctgcgcgcaatccgcatgcaccgttcgaccccatgctg
agtgtcttcagccccacgttgctggcggccattgaatcacggttgcatagagccgagcag
agcctgttgctgctcaaccggcggggttttgcggcctacgtacagtgtcatgcctgcggg
gatgtgcaggtgtgtccgcactgcagcatctcgcttacgtatcatcgcgtccccgaagcg
ctggtgtgccactactgccagtaccagcacgacatgccgtcggtgtgccccaagtgtgcg
agcgacaagctgcagcggcgcgggctgggcacgcagcaggtggagaagctggtggccgaa
cgcttccccgaggcgcgcatagcgcgcatggacgtggacaccaccagcggtaagtgggcg
cacacgcagattctcgaccgggtagggcgcggtgaggtggacattctgctgggcacgcag
atgattgccaaggggctcgactttcccaacgtcacgctggtgggcgtcatcgatgccgac
acagggctcaacctgccggactttcgtgcgtcggagcgcacgtttcagctgctcagtcag
gtggcggggcgggccggtcgcggccccaagggcggtgacgtggtggtgcaaacacgcatg
ccgcacgcgcatgcggtgcagcacgcgctcacgcacgactttctgggatttgtgcgtgag
gagttgggggcgcgccggcatccggcgtatccgccctttgtgcacattgccaacgtaatt
gtgagcggtgtgcatcagcgggccacggcggcggcggctacggaggccgccgagtgggtc
acgcagctcatgaagcgtcaggggctgcgcgatctagtgctcgtggggccggcgccgtgc
cccattgatcgcatcaaagaccggtggcgctggcactttctgctcaagagctcacagccc
aagctcatgacgcgcgtggcgcgctatgtggcggagcgctgcccggtgcccaaggattcc
gagctccggctcgtggtggaccgggatccggtgagtttgttgtag
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