Gemmatimonas phototrophica: GEMMAAP_08440
Help
Entry
GEMMAAP_08440 CDS
T04580
Name
(GenBank) hypothetical protein
KO
K02600
transcription termination/antitermination protein NusA
Organism
gph
Gemmatimonas phototrophica
Brite
KEGG Orthology (KO) [BR:
gph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gph03021
]
GEMMAAP_08440
03009 Ribosome biogenesis [BR:
gph03009
]
GEMMAAP_08440
Transcription machinery [BR:
gph03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
GEMMAAP_08440
Ribosome biogenesis [BR:
gph03009
]
Prokaryotic type
rRNA transcription factors
GEMMAAP_08440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
L27
HHH
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
AMW04858
UniProt:
A0A143BIM1
LinkDB
All DBs
Position
2053220..2054533
Genome browser
AA seq
437 aa
AA seq
DB search
MAGSAEILTALRELSNLKQITREELHGLLQDGILAALAKKHGANVQAEIEIDEVKGAIRI
VLLKTVVNEVTDESREVTLEEARFMDPEFQAGDVMEIPVDFMEFGRTAVQAAKQRIIQRV
REGERTRIRDEFAGRVGDLLSGEVQQIERGKLVVMLNKFREAEAIIPYREQNHREHYHQG
EPVRAVLKRVEDTPKGPRLILSRADALFVQALFKLEVPEIQQGIVEIKAAAREVGSRTKI
AVTSRDDAVDPVGACVGLKGARVQAVVNELGGERIDIVPWSPDPERFAKLALAPARVARV
FSDAVSRTIQAVVDEDQLSLAIGRNGQNVRLASELTGWKIDLYSSREWLEKGGEGPLFAP
LPEDEAEADIPLTEIDGLETATVAVLSEAGYNTLNDILDLNRDDLLRLPGIAPEEADRIM
SIIDELTTEDDEGGVSA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggccggatcggcggaaattctcacagcgttacgtgagctgtcgaatctgaagcagatc
acgcgcgaggagctgcacgggcttctccaggacggcattctggccgcactggccaagaag
cacggggccaacgtccaggcggaaatcgaaattgatgaagtcaagggcgccattcgcatc
gtgctgctgaagacggtggtgaatgaagtcaccgacgaatctcgtgaagtaacgcttgaa
gaggcgcgcttcatggatccggaattccaggcgggtgacgtcatggaaattcccgtcgac
ttcatggagttcggccgcacagccgttcaggccgcgaagcagcgcatcattcagcgcgtg
cgcgaaggcgagcggacccgtattcgcgatgaattcgcgggtcgggtcggtgatctgttg
tcaggtgaggtgcagcagatcgagcgcggaaagctcgtggtcatgctcaacaagttccgg
gaagcggaagccattattccgtaccgtgaacagaatcatcgtgagcattaccatcagggc
gagccggtgcgcgcggtgctcaagcgggtcgaggacacccccaaggggccgcgactcatt
ctgagccgggccgacgccctgtttgtgcaggcgctcttcaagctcgaagtgccggaaatc
cagcaggggatcgtggagatcaaggccgccgcgcgtgaagtcggaagtcgcaccaagatt
gccgtcacgtcgcgcgatgacgccgtcgatccggtcggagcgtgcgtggggctcaaggga
gcccgggtacaggcggtcgtcaacgaactgggtggcgagcgcatcgatatcgtgccgtgg
tctcccgatcctgagcggtttgcgaagctggccctggcgccggcccgcgtggcgcgcgtc
ttcagtgatgccgtgtcacgtaccattcaggccgtcgttgacgaggatcagctgtcgctg
gccatcggacgcaacggacagaatgtgcggctcgcgtcggaactgaccggctggaagatc
gacctctactcaagccgtgaatggctcgagaagggcggtgaggggccgttgttcgccccg
ctccccgaagacgaagccgaagccgatatcccgctcactgagatcgatggcctcgaaacg
gccacggtggcggtgctgtcggaagcgggttacaacacgctgaacgacattctcgatctc
aatcgggacgatctgctgcgactgccgggcatcgcgcctgaagaggcagaccgcatcatg
tcgatcatcgatgaactcacgaccgaagacgacgaaggtggtgtcagcgcgtga
DBGET
integrated database retrieval system
