Gemmatimonas phototrophica: GEMMAAP_08460
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Entry
GEMMAAP_08460 CDS
T04580
Name
(GenBank) hypothetical protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gph
Gemmatimonas phototrophica
Brite
KEGG Orthology (KO) [BR:
gph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gph03016
]
GEMMAAP_08460
Enzymes [BR:
gph01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GEMMAAP_08460
Transfer RNA biogenesis [BR:
gph03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GEMMAAP_08460
Prokaryotic type
GEMMAAP_08460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AMW04862
UniProt:
A0A143BK24
LinkDB
All DBs
Position
2058450..2059307
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AA seq
285 aa
AA seq
DB search
MSSHDVVAVVRRAARTRRVGHAGTLDPFATGLLVLAVGPCTRLLPYIVGDPKVYEADVRF
GSETDTDDATGSVTVTAPAPPNARLSHADDPVRRAAEATLTGAIAQIPPSYSAKHVDGQR
AYDLARKGRDVSLAPVQVRVDTWEWLAGDHETLRTRITCGGGTYIRALARDLGRALGSAA
HCGTLRRMASGPATVGEAVLLEDLSPGAIAEGRVRLRSPLSLLGNIGHEHLGDDQLTDLR
HGREVAASQPGHRAALLRDGVVVAIAERSARNRWQPRVVMLGDDA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcacgatgtcgttgccgtcgtgcgacgcgcggcgcgcaccaggcgcgtcggt
cacgcgggaacgttggatccgttcgccaccgggctgctcgtgcttgcggtggggccgtgc
acccgcctcctcccgtatatcgtcggtgaccccaaggtctacgaagccgacgtgcgtttc
ggctcggaaaccgacaccgatgatgcgaccggttcggttacggtcacggcgccagcgcca
cccaatgcgcggctgtcacacgccgatgatcccgtacggcgggccgccgaagccacgctc
accggcgccattgcacagattccccccagctattctgccaagcacgtcgatggtcaacgg
gcctatgatctggcccgcaagggacgcgacgtttcgctggcccctgtgcaggtgcgggtg
gatacttgggaatggctggccggggaccacgagaccctgcgcacccggatcacctgcggc
ggcggcacatacattcgggctttggcccgtgatttgggacgggccctcggatcggcggcg
cactgcgggacgttgcggcggatggccagcggaccggccaccgttggagaggccgttttg
ctcgaagacctttcccccggtgccattgctgaggggagggttcggctgcgatccccgctg
tcactcctcggaaacatcggccacgaacacctcggcgacgaccaactcaccgatctcagg
catggccgcgaggtcgcggcttcgcaacccggtcaccgggcagcattgcttcgcgacggc
gtggtggtggccatcgcggaacgttccgcccgcaaccgctggcaaccacgtgtggtgatg
ctcggagacgacgcatga
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