Gemmatimonas phototrophica: GEMMAAP_09120
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Entry
GEMMAAP_09120 CDS
T04580
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
gph
Gemmatimonas phototrophica
Brite
KEGG Orthology (KO) [BR:
gph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gph03400
]
GEMMAAP_09120
DNA repair and recombination proteins [BR:
gph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GEMMAAP_09120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DUF7125
DnaB_C
AAA_16
AAA_22
ChlI
SLFN-g3_helicase
nSTAND_NTPase5
AAA_30
Lon_C
AAA_24
AAA_14
AAA_5
AAA_19
RecA_N
NTPase_1
nSTAND3
NACHT
AAA
ATPase_2
Rad51
NPHP3_N
ABC_tran
DUF7129
Zn_Ribbon_1
Motif
Other DBs
NCBI-ProteinID:
AMW04948
UniProt:
A0A143BIW5
LinkDB
All DBs
Position
complement(2190477..2191874)
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AA seq
465 aa
AA seq
DB search
MAKAKTVYACTECGAQYPKWAGKCDSCGAWNTLAEEVVAAAPTSKRTAARAAGGVAGATV
ALGTVTSSDTPRWRTGLDEFDFVLGGGIVPGSMVLVGGEPGIGKSTLLLQVAARLEAAGQ
PTLYVSGEESALQVRLRADRLAEDASAVSLLTETSLETILATAAQPVGNGRKVNCLIIDS
IQTVHTELLEGAPGNVGQVRECAARLMRFAKDTSTTVFVIGHVTKGGGIAGPKTLEHIVD
TVLYFEGDGTLDHRVLRATKNRFGSVDEIGVFRMVGAGLIPVENPSALFLGDRRDVASGS
AVCALMEGTRPVLVEVQALAAKAGFGTPQRVANGIDSRRLALLLAVLDKRGGFSCAQLDV
FCNIVGGMRVQEPSVDLAIVAALASSVVDRPLPAQAIFLGELGLGGEVRPVSQVERRLAE
AAKLGMTTAYLSDRALPRRAPGDMRLIGVRTLTEVLQRTVGKDAA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcgaagaccgtgtacgcgtgcacggagtgtggtgcgcagtatcccaagtgg
gcagggaaatgcgacagctgtggcgcgtggaatacgctggccgaagaagttgtggcggcc
gcacccacgagcaagcgcacggcggcgcgtgcggctggtggtgtggccggcgcaacggtg
gcgttggggacggtcacatcctctgacacgccacggtggcgcacggggctcgacgaattc
gacttcgtgctgggcggcggcattgttcccggaagcatggtgctggtcggcggcgagcct
ggtataggcaagagcaccctgctgctgcaagtcgccgcgcgattggaagcagcgggacag
cccacgttgtatgtatccggcgaagagagcgcgttgcaggtgcgactgcgggcagatcga
ctggccgaagatgcgagtgccgtctcgctgcttacggaaacgtcgctcgaaaccatcttg
gcgaccgcggcgcagccggtcggcaacgggcgcaaggtgaactgcctgatcatcgattcg
atccaaaccgtgcacacggaactgctcgagggcgcaccgggcaatgtggggcaggtgcgg
gagtgtgccgcccgtctcatgcgctttgccaaggatacgagcaccacggtgttcgtcatc
gggcatgtgaccaaaggcggcggcattgccggtcccaaaacgctcgagcacatcgtggac
acggtgttgtatttcgaaggcgatgggaccctcgaccaccgggtgttgcgcgcgacgaag
aatcgcttcggcagtgtcgatgagataggggtgtttcgcatggtgggcgccggactgatc
ccggtggagaacccgtcggcgctcttccttggcgacagacgggatgttgccagtggcagc
gccgtctgtgcgctcatggaaggcacccgtcccgtgttggtggaagtgcaggcgttggcc
gcgaaagccggctttggtacgccgcaacgcgtggccaacggcatcgattcgcggcgtctc
gccctgttgctcgccgtgctcgacaagcgcggcgggttctcgtgcgcgcaactcgatgtc
ttctgcaacatcgttggtggcatgcgtgtgcaggagcccagtgttgatctcgccattgtc
gcggcgcttgcctcgagtgtggtggatcgcccattgccggcacaggccatctttctgggg
gagctcggtctcggcggcgaggtgcgaccggtgtcgcaggtggaacgccgcctggccgaa
gccgccaagctcggcatgaccacggcgtacctgtcggatcgggcgttgccacgccgggcg
cccggcgacatgcggttgatcggggtgcgtacgctgaccgaggtgttgcaacgcacggtc
ggcaaggatgccgcgtga
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