Gemmatimonas phototrophica: GEMMAAP_09470
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Entry
GEMMAAP_09470 CDS
T04580
Name
(GenBank) hypothetical protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
gph
Gemmatimonas phototrophica
Pathway
gph00550
Peptidoglycan biosynthesis
gph01100
Metabolic pathways
gph01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
gph00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GEMMAAP_09470
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GEMMAAP_09470
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gph01011
]
GEMMAAP_09470
Enzymes [BR:
gph01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GEMMAAP_09470
Peptidoglycan biosynthesis and degradation proteins [BR:
gph01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
GEMMAAP_09470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF1485
Motif
Other DBs
NCBI-ProteinID:
AMW04994
UniProt:
A0A143BKN5
LinkDB
All DBs
Position
complement(2268960..2270696)
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AA seq
578 aa
AA seq
DB search
MRRARVARALLVLIFTVLGGAFFRTQVLQNAEFVLASESNRLREVPLPGARGIIYDRHGA
IIAENLPGYSVSILSPTTDSLRSALRSLSRIIEIDSAQQALAIRRYRAAPTRPAVIFNDA
SFQVVSVLEERRSEFPGLIIQSAPKRYYPDAQAVAALVGYTGEISPEQLELPRYDAYKAG
QQVGKGGLELQYEEQLRAREGSRFVEVDAKNRVVRDNGVRPEVQPEAPPPLRTNIDLDLQ
RYSHEYFGDSLRGAVVALEPQTGGVLAIYSAPSYDINRFIGGVSNAYYKELQEHQYTPLF
NRALSGRYPPASTWKLATAALGMELGLVTMETHMETPCTGGYYYGRVFKCWDKRGHGDIT
LAQAIAKSCDVYFYQLGLKIGITRLLAGGVRLGFGEPTGIDMPGEKRSIWPRSTEYFDRT
YGPRGWNKSVVLSLSIGQADNSQTPINMARFYTALATDGYAATPQIVARTPERKKLLNLN
AEQIKSIQVALADVVSRGTAAGAQIQGLTIAGKTGTAQVTGQEDYAWFVGYAPADKPRIV
LAIIIEEGLHGSTAAKVATKLMERYLKAKLTMTAVTND
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
ttgcgccgcgcgcgggtggcgcgggcgctgctggtgctcatttttaccgtgcttggcggt
gcgttcttccgcacgcaggtcttgcagaatgccgagttcgtgctggcatcggaaagcaat
cgtttgcgggaggtaccacttccgggggcgcgcggcatcatttacgaccgccatggcgcc
atcattgccgaaaacctccccggttactccgtctcgatcctgagtccaaccacggactcc
ttgcgatcggcgttacggtccctgtcgcgcatcatcgagatcgattcggcgcagcaggcg
ctggccattcgtcgctatcgggcagcgccaacacgaccggccgtgatcttcaacgatgcc
agctttcaagtggtgtccgtgctggaggagcgacgctcggagtttcccgggttgatcatt
caaagcgcacccaaacgctactatccggatgcgcaggcggtcgcggcgctggttggatat
accggtgaaatttccccggagcagctcgagctgccgcgctacgatgcctacaaggcggga
caacaggtgggcaaaggcggactcgaactgcagtacgaagagcagttgcgcgctcgtgaa
gggagtcggttcgtcgaggtggatgcgaagaatcgtgtggttcgcgacaatggcgtgcgc
ccggaggtacaacccgaggcgccaccgccattgcgcaccaacatcgatctcgatctccag
cggtattcgcatgagtacttcggcgactcgctgcgtggtgccgtggtggccctcgagccg
cagacgggcggtgtactcgccatctacagcgcccccagctacgacatcaaccggttcatc
ggtggagtgtcgaatgcgtactacaaggaattgcaggagcaccagtacacgccgctcttc
aaccgcgcgttgtcggggcgatatccgcccgcgtccacctggaagctggccacggccgcc
ctgggcatggagcttggcctcgtcaccatggagacgcacatggagacgccctgtacgggc
ggctactactacgggcgtgtcttcaaatgctgggacaagcgtggacacggggatatcacg
ctggcgcaggcgatcgccaagtcgtgcgacgtgtacttctatcagctcgggctcaagatc
ggcatcacgcggttgctcgcgggcggtgtgcggctgggtttcggcgaacccacgggcatt
gatatgcccggagaaaagcgttccatctggccgcgcagcacggagtactttgaccgcacg
tacgggcctcgcggctggaacaagtcggtggtgttgagcctgtccattggacaggcggac
aactcacagacgcccatcaacatggcgcgcttttatacggcgctcgccacggacggctac
gccgccacgccgcagattgtcgcgcgtactccggaacgcaagaagctgctcaatctcaac
gccgaacagatcaagagcattcaagtggcgctggccgatgtcgtgagccgtggcacggcg
gcgggtgcccagattcagggactgaccattgccggcaagacgggcacggcacaggtcact
gggcaggaagactacgcctggttcgtcggctatgcgccggcagacaagccgagaatcgtg
ctggccatcattatcgaagaagggctgcacggttcaacggccgccaaggttgccaccaag
ctcatggaacgctatctgaaggctaagctgaccatgaccgccgttaccaacgactga
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