Gemmatimonas phototrophica: GEMMAAP_09705
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Entry
GEMMAAP_09705 CDS
T04580
Name
(GenBank) hypothetical protein
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
gph
Gemmatimonas phototrophica
Pathway
gph03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GEMMAAP_09705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gph03400
]
GEMMAAP_09705
Enzymes [BR:
gph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GEMMAAP_09705
DNA repair and recombination proteins [BR:
gph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GEMMAAP_09705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Trm5_N
Motif
Other DBs
NCBI-ProteinID:
AMW05029
UniProt:
A0A143BJ34
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All DBs
Position
complement(2319421..2320677)
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AA seq
418 aa
AA seq
DB search
MASRRTSGYGPSVPADESPGSTPEAAIAVHTLTSAAKDLIEGAFPPLWVRGEVTNFKAHR
NGHWYFSLRDAEAQINCVIWSSAAKRIPAPPDEGMQVLALGQMTVWPVRGDLQFSVRALE
AAGDGLWRKALEQTRLRLEKDGLLDPSRKRPLPAFPRRIAVITSPDGAAMHDIITVARSR
SADVELVIIPAKVQGEGAPESLVAAIGKLARWNDADLLIIGRGGGSREDLWAFNDERVAR
ALAGCPIPTVSAVGHEVDVSICDLVADVRAATPSAAAELAVPSRREVIARVDALGKRLAA
AAKRREDRAIASLTQVQKRLGVAAQRVVERRRARVELVAGQLQALSPLSTLARGFAVART
PGGATLSSWKQLPAGAPFDLWLRDGIVAATAGDHRPLPDGMIGSAEPSMDDTPQTERT
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgcgtcgcaccagcgggtacgggccgtcggtgcctgccgacgagtcgccgggc
agcacacccgaggcggccattgcggtgcataccttgacgtctgccgccaaggatctgatt
gaaggggccttccctccgctgtgggtgcggggcgaggtcaccaacttcaaggcacaccgt
aacgggcactggtacttctcgctccgcgatgccgaggcgcagatcaactgcgtcatttgg
agctctgcggccaagcgcattccggctccccctgatgaagggatgcaggtcctggcgctt
gggcagatgacggtctggccggtgcgaggcgatctgcagttctctgtacgggcactcgaa
gccgctggcgatggactctggcgaaaagcgctcgagcagacgcggctgcggctcgaaaag
gacgggttactcgatccctcgcggaaacggccgctgccggcgtttccgcggcggattgcc
gtgattaccagcccggacggcgcggccatgcacgacatcattacggtggcccgtagccgc
agtgcggatgtggaactggtgatcattccagccaaggtacagggcgagggcgccccggaa
tcgctggtggcggccattggtaagctggcgcggtggaatgatgccgacctgctcatcatt
ggccgtgggggaggctcgcgggaggatctgtgggccttcaacgacgagcgggtagcccgg
gccttggcaggttgtcccatcccgacggtctccgccgtaggccacgaggtggacgtgagc
atctgcgacctggtggctgatgtgcgtgcggccacgccttctgccgcggcggaattggcg
gtgccgtcacgccgcgaggtaattgcacgcgttgacgccctcgggaagcgtctcgccgcc
gccgccaagcgtcgggaagaccgcgccatcgcgtcgctcacccaggtgcagaaacgcctc
ggggtcgcggcccagcgtgtcgtggagcgacgccgggcgcgcgtggagttggtcgccggg
caattgcaggccctgtcgcctctgagcacactcgcccgagggtttgcggtggcgcgaacg
cccgggggcgctactttgtccagttggaagcagttacctgccggcgcgccgttcgatttg
tggctgcgcgacggcatcgtagctgcgacagcgggcgaccaccgcccactgcccgatggc
atgattggatcggccgagcccagcatggacgacacgcctcagacggagcgcacatga
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