Gemmatimonas phototrophica: GEMMAAP_12040
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Entry
GEMMAAP_12040 CDS
T04580
Name
(GenBank) formate dehydrogenase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
gph
Gemmatimonas phototrophica
Pathway
gph00630
Glyoxylate and dicarboxylate metabolism
gph00680
Methane metabolism
gph01100
Metabolic pathways
gph01120
Microbial metabolism in diverse environments
gph01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
gph00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GEMMAAP_12040
09102 Energy metabolism
00680 Methane metabolism
GEMMAAP_12040
Enzymes [BR:
gph01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
GEMMAAP_12040
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4_10
Fer4
Fer4_9
Fer4_8
Fer4_21
Fer4_17
Fer4_6
Fer4_15
Fer4_2
Fer4_4
Fer4_16
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
AMW05335
UniProt:
A0A143BL63
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Position
2871022..2873775
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AA seq
917 aa
AA seq
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MIDRPADRHAPDASLVHLTIDGIEVAVAPGTSVMQAARTVGVKIATLCATDSLKAFGSCR
LCVVDIAGRRGLPASCTTPVEPGMTVRTQTPQVARVRRNVMELYISDHPLDCLTCAANGD
CELQDMAGAVGLREVRYGYDGSNHLTASKDESNPYFTFDPAKCIVCSRCVRACDEIQGTF
ALSITDRGFASKVSAGMDEGFLASECVSCGACVQACPTATLIEKTVIDAGQPDRTVQTTC
AYCGVGCSFEAQLKGNDVVRMVPDSTGGANEGHSCVKGRFAWGYATHSDRVLSPMIREHI
SDAWREVSWDEAIEFAASRFSSIQRRHGRDAIGGVSSSRCTNEEVYVVQKMIRAAFQNNN
IDTCARVCHSPTGYGLKQTFGTAAGTQDFKSVEHADVIMVIGANPTDAHPVFGARMKRRL
RQGAKLIVLDPRRIDLVRSPHVSAAYHLQLRPGTNVAVINALAHVIVTEQLVNEAFVSDR
CDARSFAQWKAFIAEPAQSPEATEVFTGVPAQQVRDAARLYATGGNAAIYYGLGVTEHSQ
GSTMVLGIANLAMVAGQIGREGTGVNPLRGQNNVQGSCDMGSFPHELPGYRHISDDTTRA
QFEQAWNVPLDPEPGMRIPNMLASAITGQFRGMFIQGEDLAQSDPNTLHVTAALSAMECV
VVQDLFLNETAKYAHIFLPGTAFLEKDGTFTNAERRINRVRPAMPPRTGLPEWEAVCRLA
TAMGYPMHYSSASQIMDEIASLTPTFAGVSFEHLDRVGSVQWPCTEQRPAGTRIMHEQEF
VRGRGRFLITQYVPTDERSTRKFPLLLTTGRILSQYNVGTETRRTANTVWHPEDVLEIHA
HDAEVRGIADGDVVLLSSRKGTITLHAHVSDKLPEGVVYTTFHHPEAAANVVTTEYSDWA
TNCPEYKVTAVEVRPFD
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaccgaccagcagaccgtcatgcgccagatgccagtctggtgcacctgactatc
gacggaatcgaggtggctgtcgcaccgggcacgtcagtcatgcaggcggcccgaaccgtc
ggtgtgaagatcgccacgctctgtgccaccgattcgctcaaagcctttggctcctgtcgc
ttgtgcgtggtggatattgccggtcgccgaggccttccggcctcgtgtacgacaccggtg
gaacctgggatgacggtgcgcacccagaccccgcaggtggcgcgggtgcggcgcaatgtc
atggagctctacatctccgaccatcccctcgactgcctcacctgcgcggcaaatggcgac
tgcgagttgcaggatatggccggcgccgtcggactgcgggaagtgcgatacggctacgac
ggcagcaatcatctcacggccagcaaagacgagagcaacccgtatttcaccttcgatccg
gccaagtgcattgtctgctcgcgctgtgttcgtgcctgcgacgaaattcaggggactttc
gcgctgagcatcaccgaccggggctttgcgtcgaaggtcagtgccggcatggacgaaggc
tttctggcgtcggaatgcgtgtcctgcggcgcctgcgtgcaggcctgtcccacggcaacc
ctcattgaaaaaacggtcatcgatgcgggccagccagatcgcacggtgcaaacgacttgt
gcctattgcggcgtgggctgttcgtttgaggcgcagctgaagggcaatgacgtggtgcgc
atggtgccggacagcaccggcggagccaacgaggggcactcgtgcgtgaaagggcgcttt
gcctgggggtatgcaacgcatagcgaccgtgtgctctcacccatgattcgcgagcacatt
tccgatgcgtggcgggaagtgagctgggatgaagccattgagttcgccgccagtcggttc
agctccatccagcgccgacatggccgggacgccattgggggtgtttcatcgtcgcgatgc
acgaacgaagaagtgtatgtggtgcagaagatgatccgcgcggcgtttcagaacaacaac
atcgatacctgtgcccgcgtctgtcattccccaacggggtatggtctcaagcaaaccttt
ggcacggccgctggcactcaggacttcaagtcggttgaacacgccgacgtcatcatggtc
atcggtgccaatcccaccgatgcgcatcccgtctttggtgcccgcatgaagcgacgcctc
cggcagggggcgaaactcatcgtgcttgatccccggcgtatcgacctggtccgatcgccg
catgtgtcggccgcatatcacctgcagcttcgtcccggcacgaacgtggcagtcatcaat
gcgctggcgcatgtcatcgtgaccgagcagctggtgaacgaggccttcgtgagtgatcgc
tgcgatgcgcgctcctttgcccagtggaaggcattcattgcggaaccggcacagtcaccg
gaagccaccgaggtctttaccggtgtccccgcgcagcaggtccgcgacgcagcgcggctg
tatgcaaccggtggaaacgccgccatctactatggccttggcgttaccgagcacagtcag
gggagcacgatggtgctgggtattgccaatctcgccatggtggccggtcagattggtcgg
gaaggcactggggtgaatccactgcgcggacagaacaacgtgcagggatcctgcgacatg
ggctcgttcccgcacgagttgcctggataccggcacatttccgacgacaccacccgcgca
cagttcgaacaggcctggaatgtgcccctggacccggaaccggggatgcgaatccccaac
atgctggcctcggccattaccggacagtttcgtggcatgttcattcaaggggaggatctc
gcgcagtccgatcccaacaccctccatgtcaccgctgcgttgagcgccatggaatgtgtc
gtggtgcaggacctctttctgaatgagaccgccaagtatgcccacatctttcttccgggc
acggcctttcttgagaaggatgggaccttcactaacgccgaacgtcgcatcaatcgggtt
cgcccggccatgcctccacgtaccggattaccagagtgggaagcggtctgtcgactggcc
actgccatgggctaccccatgcactattccagtgcgtcacagatcatggacgagatcgcg
tcgctcacgccgacattcgccggcgtctcgttcgagcatctggatcgtgtgggaagtgtc
cagtggccctgcaccgagcaacgtcctgcgggaacgcgcatcatgcacgagcaggagttt
gtccgcggtcgcgggcggtttctcattacccagtatgtccccaccgacgagcgttcgacg
cgaaagtttccgctcttgctgaccaccggacgcattctgtctcagtacaacgtcggtacg
gaaacgcgtcgcaccgccaatacggtgtggcatccggaggatgttctggagattcacgcg
catgatgccgaggtccgcgggattgccgatggtgacgtggtcctgctctccagccgaaag
gggaccatcacgttgcacgcgcatgtcagcgacaagcttcccgaaggcgtggtatacacc
acctttcatcatccggaagcggcggcaaacgtggtaactaccgaatattccgattgggca
accaattgcccggagtacaaagtcacggctgtcgaggtccgcccctttgactga
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