Gemmatimonas phototrophica: GEMMAAP_12265
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Entry
GEMMAAP_12265 CDS
T04580
Name
(GenBank) cystathionine gamma-synthase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
gph
Gemmatimonas phototrophica
Pathway
gph00260
Glycine, serine and threonine metabolism
gph00270
Cysteine and methionine metabolism
gph00450
Selenocompound metabolism
gph00670
One carbon pool by folate
gph01100
Metabolic pathways
gph01110
Biosynthesis of secondary metabolites
gph01230
Biosynthesis of amino acids
Module
gph_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
gph00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GEMMAAP_12265
00270 Cysteine and methionine metabolism
GEMMAAP_12265
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
GEMMAAP_12265
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GEMMAAP_12265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gph04147
]
GEMMAAP_12265
Enzymes [BR:
gph01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
GEMMAAP_12265
Exosome [BR:
gph04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GEMMAAP_12265
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
GDC-P
Met_gamma_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AMW05366
UniProt:
A0A143BJX7
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All DBs
Position
2921738..2922907
Genome browser
AA seq
389 aa
AA seq
DB search
MTRIYDEDLAGGLSTRAIHAGQRPDPVSGAIMTPLYLTSTYVQESIGVNKGYEYARGKNP
TRQALERNVAILEGGTHGFAFGSGMGCLDSIMKLFRAGDHIVCAENVYGGTFRLFDRILQ
HMGLSFTYVDTGDPQRVEEAMTASTRALLVETPTNPLMRLTDLRAMSDVAKRHQALLIVD
NTFATPIYQRPLEMGADIVWHSTTKYINGHSDMIGGLAVVLEDDLADRLQFILNAAGAVP
GPFDAWLALRGTKTLPLRMKQHDLNGRAVAEYLVNRLGPERVIYPGLTTHPQHELAKRQM
SAFGGMMTLELGSKDNARQFLEKVRVFSLAESLGGVESLTNHPYTMTHGSVPADVKDAMG
LTEGMVRLSCGIEDVEDLIEDLEQALVGI
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgactcgcatttacgacgaagatctcgccggtggtctgtccactcgcgccattcacgcc
ggccagcgccccgacccggtgtcgggcgccatcatgacgccgttgtacctcacctccacc
tacgtgcaggagagtattggcgtcaacaaggggtacgaatacgcccggggcaagaatccc
acgcggcaggcgctggagcgtaacgtcgccatcctcgagggcggcacgcatggcttcgcg
ttcggcagtggcatgggatgcctcgactcgatcatgaagctgttccgtgccggcgaccac
atcgtgtgcgccgaaaacgtctacggcggcactttccggctgttcgatcgaattctgcag
catatgggactgtccttcacgtatgtggataccggcgatccgcagcgcgtggaagaagcc
atgacggcctcaacacgtgccctgctggtggagacgcccacgaacccgctcatgcggctc
accgacctgcgagccatgagcgacgtcgccaagcgacaccaggcgttgctgatcgtcgac
aacacgtttgccacgccgatctaccagcggccgctcgaaatgggagcggatatcgtctgg
cattcgaccacgaagtacatcaacggtcactctgatatgatcggcggcctcgcagtggtt
cttgaggacgacctcgccgaccgcctgcagttcattctgaacgcggccggcgccgttccg
ggccccttcgacgcctggctggcgctgcgggggacgaaaacgttgccgctgcgtatgaag
cagcacgatctcaatggccgggcggtcgcggagtacctcgtgaatcgtcttggtccggag
cgtgtgatttatcccggcctcaccacccacccgcaacacgagctcgccaagcgccagatg
tcggcctttggcggcatgatgacactggaactgggctcaaaggacaacgcccggcagttt
ctggagaaggtccgggtgttctcccttgccgagtcactgggcggggtggaaagcctcacc
aatcacccctataccatgacgcacggctcggtcccagccgacgtgaaggacgccatgggg
ctcacggaagggatggttcgcctgagctgcggcattgaggacgtcgaggacctcattgag
gatctggagcaggcgttggtggggatttga
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